| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1944 |
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| Symbol | |
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| ID | 3742003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1859269 |
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| End bp | 1860756 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637772139 |
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| Product | phytoene dehydrogenase related enzyme |
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| Protein accession | YP_377945 |
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| Protein GI | 78185510 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTGA TCGGTGGTGG CATCGCAGGC CTCACCGCAG CCGCCCTGTT AGCCCACGAC
GGGGTTGCAG TGACCTTGTT TGAGGCCCAT CACCAAGCAG GAGGGTGCGC CGGCACCTTC
CGCCGCGGCC CCTGGATTTT TGATGTTGGA GCCACTCAAG TGGCAGGCCT CGAACCTGGT
GGCAGTCACG CAAGAGTTTT CCAGCATCTG GGATTGGCTC TGCCCAAAGC GAGCTTGCTC
GATCCAGGTT GTGTCGTCGA CCTTGGCGAC GGTTCAGCAC CCATCAGTCT TTGGCACGAT
CCGACGCGAT GGGCAGAAGA ACGGGTTCGT CAGTTCCCTG GCAGCGAGCG GTTTTGGCAA
CTCTGTGAGC TCTTACACAA CAGCAACTGG GCATTCGCCG GGCGTGATCC AGTCGTGACA
CCCAGATCTT GGTGGGACCT CAGCACGCTG GTCTCAGCCT TACGACCTGA GACGTTGGCC
TCAGGCCTAT TTACAACGTT CTCAATCGCC AATCTCCTGC AGTTCTGTGG CTGCCAAAAC
GACAAGCGAC TGCGACGTTT TTTAGATCTA CAACTCAAGC TCTATTCCCA GGAGCCCGCA
GATCGCACGG CAGCTCTCTA CGGCGCCACC GTTCTGCAAA TGGCTCAAGC CCCACTTGGG
CTTTGGCATC TTCAGGGGTC AATGCAAGTG CTCAGTGCAC AGCTCTCTCA GGCCATCGAA
GCTGCTGGGG GAGAGATCCG ACTCCGTCAT CGCGTGCACG CTGTGCAGCC TTCAGCAGAA
GGCTGGACCG TCTCAACGGC AGGGGCTAAC GCGCCATCAC AGGACTGGCA TGCCAGCGAC
GTGATCTGCA GCCTGCCACC CCAATGCCTG CTGGACTTGT TACCAGCAGA CGACACACCT
GATCGTTACC GGCAACGGCT CACAACCCTG CCGGAACCCA GTGGAGCCCT CGTGCTGTAC
GGCGTCGTGC AGCGAAACGC ACTGCCAATC GACTGTCCAG GCCATCTTCA ACGGGGCAGC
GAAAAGCCTG GTTCATTGTT TGTTTCGATT AGCCGAGAAG GCGATGGGCG CGCCCCCATC
GGGCAAGCCA CCTTGATCGC CAGCGTGTTC ACACCGACGG CCGACTGGTG CGAGCTCGAT
GAACCCGACT ACCAGAACCG AAAAACACAA CGGCTAAAGA CGATGAAGCA TGAACTCAAC
GCGTGGCTCG GACTCAGCGA TGACGATTGG CTCCATACGG AGTTGGCCAC ACCGCGCGGC
TTCGCAGGAT GGACCGGACG GCCCCGCGGA ATGGTGGGTG GCCTCGGGCA GCACCCAAGC
CGATTTGGAC CCTTTGGCCT TGCAGGCCGC ACTCCCTTGC CAGGACTGTG GTTATGCGGC
GACAGTCTCT ACCCCGGAGA AGGCACTGCT GGTGTGACTC TCTCCGCACT GAATGCTTGC
AGGCAGCTGA TGGAGCATCG GGGACTTCAG TTGAGTTTCA ATCGCTGA
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| Protein sequence | MIVIGGGIAG LTAAALLAHD GVAVTLFEAH HQAGGCAGTF RRGPWIFDVG ATQVAGLEPG
GSHARVFQHL GLALPKASLL DPGCVVDLGD GSAPISLWHD PTRWAEERVR QFPGSERFWQ
LCELLHNSNW AFAGRDPVVT PRSWWDLSTL VSALRPETLA SGLFTTFSIA NLLQFCGCQN
DKRLRRFLDL QLKLYSQEPA DRTAALYGAT VLQMAQAPLG LWHLQGSMQV LSAQLSQAIE
AAGGEIRLRH RVHAVQPSAE GWTVSTAGAN APSQDWHASD VICSLPPQCL LDLLPADDTP
DRYRQRLTTL PEPSGALVLY GVVQRNALPI DCPGHLQRGS EKPGSLFVSI SREGDGRAPI
GQATLIASVF TPTADWCELD EPDYQNRKTQ RLKTMKHELN AWLGLSDDDW LHTELATPRG
FAGWTGRPRG MVGGLGQHPS RFGPFGLAGR TPLPGLWLCG DSLYPGEGTA GVTLSALNAC
RQLMEHRGLQ LSFNR
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