| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1870 |
|---|
| Symbol | |
|---|
| ID | 3742183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1797514 |
|---|
| End bp | 1798770 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637772065 |
|---|
| Product | carbohydrate kinase FGGY family |
|---|
| Protein accession | YP_377871 |
|---|
| Protein GI | 78185436 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTC TGGTGCTCGG TATTGATCTG GGCACCAGTG GCGTTCGCAT TGCCGTACTG
GATCAAGGGC ATTCCATCCA GCACTCGGAT TCGATTCCTT ACAAGCTTGG ACTCCATAGG
CCCGATGACT GGACGCGGGC CTGCTCCACG TTGATTGCTG GAATCCCTGC AGAGCAGCGG
TCCAACATTC GGGCGCTGGC TGTTGATGGC ACATCAGGAA CATTGCTCGC CTGTGATTTA
GAGGGACGGG TCCAGGGTGA AGCGCTGCTG TATTCAGAGG TTTACCAAGG CTTTGAGCAA
CAGCTGCATC AGCTTCTACC CGAAGGTGGA CCAGCCTCCA GCAGCAGTGG AAGCCTGGCG
CGGGCACTGC AACTCACAAA GTTGTATGGC CCGACGACCC TCCTGCGTCA TCAGGCGGAC
TGGATCAATG GTTGGTTTTT AGGGGATTGG AGTTGGGGAG AAGAAGGGAA CAATCTGCGG
CTGGGGTGGA ACTTGGAACG CGAATGCTGG CCAGCGCTGC TCACCCAGGC ACCGTGGAAA
AAACGACTCC CCGTCATTCG CGCCAGTGGA GATCAACTTG GCCAGATCTC AAAACGTCGA
GCGAAGGAGC TCGGCTTACC CAGCGATGTT CAAATCATTG CTGGAACAAC AGATGCCAAT
GCGGCGGTGC TGGCGACTGA TCCTGGCGAT GATGACGGAG TCACCGTGTT GGGCACCACG
CTGGTGATGA AGCGCTTCAC AACAGTCCCG ATCAGCGGAC CAGGCATCAC ATCTCATCGC
GTCGGAGGAC GCTGGCTCTG CGGCGGCTCA TCCAATGCTG GCGCTGGGGT GCTGCGTCAA
TTCTTCAGCG ATGAACTGCT CACTGAACTC AGCCGGCAAA TTAACCCAGA CACCAATAGC
GGCCTTGCAT TTCGCCCATT GCCGCGACCT GGCGAGCGGT TCCCAGTAGA TGATCCGTCC
TTGATGCCCA TCCTCGAGCC ACGGCCCGTC AGCGATGCCT TATTTCTCCA GGGCTTATTG
GAGGGACTTG CCGACATCGA AGCGCAGGGA TGGCACACCT TGACGGCATT GGGAGCAAAA
CCACCCAAAC GACTGATCAG CATCGGGGGT GGCGCACGAA ATCCTCAATG GCGACGCATC
AGGGAACGTC GTCTAGGCGT GCCAGTGATC ACATCCCAAC AGCAGCCAGC AGCGGGAGTT
GCCCGGCTCG CTCTCGCCTG GCTCGATGCA TCCAGACCAT CGACTCAGCA AGGCTGA
|
|---|
| Protein sequence | MTSLVLGIDL GTSGVRIAVL DQGHSIQHSD SIPYKLGLHR PDDWTRACST LIAGIPAEQR
SNIRALAVDG TSGTLLACDL EGRVQGEALL YSEVYQGFEQ QLHQLLPEGG PASSSSGSLA
RALQLTKLYG PTTLLRHQAD WINGWFLGDW SWGEEGNNLR LGWNLERECW PALLTQAPWK
KRLPVIRASG DQLGQISKRR AKELGLPSDV QIIAGTTDAN AAVLATDPGD DDGVTVLGTT
LVMKRFTTVP ISGPGITSHR VGGRWLCGGS SNAGAGVLRQ FFSDELLTEL SRQINPDTNS
GLAFRPLPRP GERFPVDDPS LMPILEPRPV SDALFLQGLL EGLADIEAQG WHTLTALGAK
PPKRLISIGG GARNPQWRRI RERRLGVPVI TSQQQPAAGV ARLALAWLDA SRPSTQQG
|
|---|
| |