| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1864 |
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| Symbol | |
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| ID | 3742177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1791891 |
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| End bp | 1793450 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637772059 |
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| Product | photosystem II chlorophyll-binding protein CP47 |
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| Protein accession | YP_377865 |
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| Protein GI | 78185430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03039] photosystem II chlorophyll-binding protein CP47 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTGC CCTGGTATCG GGTGCACACC GTCGTCATCA ATGACCCGGG TCGCCTTTTG
GCGGTGCACC TCATGCATAC AGCCCTCGTT GCCGGCTGGG CCGGCTCCAT GGCTCTGTAC
GAATTAGCGA TTTTCGATCC ATCCGATGCT GTCCTGAACC CCATGTGGCG TCAGGGCATG
TTTGTGATGC CCTTCATGTC TCGCCTGGGA GTTACCGGGA GCTGGGGTGG TTGGAGCATC
ACTGGTGAAA CCGGGGTTGA CCCTGGCTTC TGGAGCTTCG AAGGTGTTGC CGCCGCCCAC
ATTATTTTTT CAGGCCTGCT GATGCTGGCC GCCATCTGGC ACTGGACCTA CTGGGATCTT
GAGATCTGGC AGGACCCCAG AACCGGAGAA CCAGCCCTTG ATCTTCCAAA GATTTTTGGC
ATTCACCTTC TACTAGCTGG CCTTGGCTGC TTTGGATTCG GTGCTTTCCA TCTCACTGGT
GTTTTTGGGC CTGGCATGTG GATTTCTGAT CCATATGGAA TTACTGGTCA CCTAGAGGCT
GTACAACCGT CTTGGGGTCC GGAAGGATTC AATCCGTTTA ACCCCGGTGG GATCGTTGCC
CACCACATTG CAGCTGGAAT TGTCGGCATC ATCGCTGGCA TTTTCCACAT CACCACGCGA
CCGCCCGAGC GCCTCTACAA GGCTCTCCGG ATGGGCAACA TTGAAACTGT CTTAGCGAGT
GCAATCGCGG CTGTTTTCTT TGCTGCTTTC ATCGTTGCTG GAACCATGTG GTACGGCTCA
GCTGCTACCC CAGTCGAGCT TTTCGGCCCT ACTCGTTATC AGTGGGATCA GAGCTACTTC
AAGACGGAGA TCAACCGTCG CGTTCAAACC GCTATGGACG ACGGTGCAAG CCGTGAAGAA
GCGTTTGCAG CCATTCCAGA GAAACTGGCG TTCTACGACT ACGTGGGCAA CAGCCCTGCC
AAGGGTGGAT TGTTCCGAGT TGGCCCGATG GTGAACGGTG ACGGCCTTGC CACTTCATGG
CTGGGTCACG TTGTGTTCAC CGACAGCAAT GGTCGTGAGT TGCAAGTTCG TCGTCTGCCG
AATTTCTTCG AGAACTTCCC AGTGATTCTG GAAGACGAGC AAGGCATTGT TCGTGCTGAC
ATTCCTTTCC GCCGTGCGGA AGCGAAGTAT TCCTTCGAAC AACAAGGCGT TACTGCTCAG
GTGTTTGGCG GAGCCTTGGA TGGTCAGAAG TTCACGGATC CTGCTGATGT GAAACGTTTG
GCCCGCAAGT CGCAGTTGGG AGAAGCGTTC GATTTCGATC GCGAAACCTA CAACTCTGAT
GGTGTCTTCC GCAGTTCACC TCGCGGTTGG TTCACGTTCG GCCACGCCAC CTTCGCGCTG
CTCTTCTTCT TTGGACACAT TTGGCATGGG GCACGCACCC TGTACCGCGA TGTGTTTGCT
GGTATCGATC CAGACCTTGG AGACCAGGTG GAATTCGGCC TGTTCGCCAA GCTGGGCGAC
AAGACCACAC GTCGTCTTCC AGAGGGCTAC GTGCCCCCTG CAGGAACGCC TCTCAACTGA
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| Protein sequence | MGLPWYRVHT VVINDPGRLL AVHLMHTALV AGWAGSMALY ELAIFDPSDA VLNPMWRQGM
FVMPFMSRLG VTGSWGGWSI TGETGVDPGF WSFEGVAAAH IIFSGLLMLA AIWHWTYWDL
EIWQDPRTGE PALDLPKIFG IHLLLAGLGC FGFGAFHLTG VFGPGMWISD PYGITGHLEA
VQPSWGPEGF NPFNPGGIVA HHIAAGIVGI IAGIFHITTR PPERLYKALR MGNIETVLAS
AIAAVFFAAF IVAGTMWYGS AATPVELFGP TRYQWDQSYF KTEINRRVQT AMDDGASREE
AFAAIPEKLA FYDYVGNSPA KGGLFRVGPM VNGDGLATSW LGHVVFTDSN GRELQVRRLP
NFFENFPVIL EDEQGIVRAD IPFRRAEAKY SFEQQGVTAQ VFGGALDGQK FTDPADVKRL
ARKSQLGEAF DFDRETYNSD GVFRSSPRGW FTFGHATFAL LFFFGHIWHG ARTLYRDVFA
GIDPDLGDQV EFGLFAKLGD KTTRRLPEGY VPPAGTPLN
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