Gene Syncc9902_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1843 
Symbol 
ID3742136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1770047 
End bp1770883 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID637772035 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_377844 
Protein GI78185409 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTGAGC TACCTGAAGT TGAGACGGTT CGCCGAGGAT TAGCGGACCG TCTTGAATCG 
TTTGAAATCG CTGAAATCGA AGTCTGCCGT GCGAGGGCAA TCGCGAGTCC GGGCGGAGTC
GATCACTTTG TGGCGGGCCT GAAGGGTGCC ACGGTTGGAG CCTGGTCTCG CCGAGGCAAA
TACCTCATGG CACAGCTCGA GCCCAATCGA GGTAGCTGGG GCGTGCATCT GCGAATGACC
GGCCAATTTC AATGGCATGC CACGCCAGCA GCACCATGCA GTCACACGCG CGTGCGTTTT
TGGAATCAAC ACAACGAGGA ACTGCGGTTT GTTGACTTGC GCAGCTTCGG AGAAATGTGG
TGGATACCAG AAGGCGACGA CCTCGACAGC GTGATGACCG GCCTTAAACG ACTGGGGCCA
GAACCCTTCA GCGATGCATT TACGGGTGCC TATCTCAAGC AACGGCTTAA GGGTTCAGCA
CGACCCATTA AAACCGCACT GCTGGATCAA TCTCTGATTG CCGGAGTAGG AAACATCTAT
GCCGATGAGA GCTTGTTCGC GGCCGGAATT CCACCTCTCT CACCATCGGG GAAGCTCACG
ATCGAACAAC TGATCCGACT CCGAGATGAA CTGGTCAACG TGCTGCACAT CAGCATCGGG
GTTGGAGGAA CAACCTTCAG CGACTTTCGA GATCTTGAAG GCGTCAATGG GAACTATGGG
GGGCAGTCGT GGGTGTATCG CCGGAGCGGA CAGCCTTGCC GCAAGTGTGG AACGCCCATC
AGCCGTGAAA AGTTGTCGGG CCGGAGCACC CACTGGTGCC CGAGCTGTCA GCGCTAA
 
Protein sequence
MPELPEVETV RRGLADRLES FEIAEIEVCR ARAIASPGGV DHFVAGLKGA TVGAWSRRGK 
YLMAQLEPNR GSWGVHLRMT GQFQWHATPA APCSHTRVRF WNQHNEELRF VDLRSFGEMW
WIPEGDDLDS VMTGLKRLGP EPFSDAFTGA YLKQRLKGSA RPIKTALLDQ SLIAGVGNIY
ADESLFAAGI PPLSPSGKLT IEQLIRLRDE LVNVLHISIG VGGTTFSDFR DLEGVNGNYG
GQSWVYRRSG QPCRKCGTPI SREKLSGRST HWCPSCQR