Gene Syncc9902_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1810 
Symbol 
ID3742260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1733806 
End bp1734600 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content49% 
IMG OID637772002 
ProductBand 7 protein 
Protein accessionYP_377811 
Protein GI78185376 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCC CAAGACCCGT CAACGACCCC GCGAACACAG TGATTGTGCT TGTAGCCATC 
GTGCTCAGCG CTCTCTTACT TGTCGGTCAA GCTCTATTTA TTGTCCCGGC AGGCAAAGTT
GCCGTGGTGA CCACGTTAGG GAAAGTGAGT GGAGGGTCTC GCCTCCCTGG ACTCAATCTC
AAAATTCCGC TGATCCAGTC CGTCAATCCT TTCGACGTTC GCACCCAAGT GCGACCTGAA
GAATTCTCAA CTCTTACGAA AGATCTTCAG GTGATTGAGG CCACTGCAAC AGTGAAATAC
GCGGTTCGAT CGGAAGAAGC TGGCAGAATT TACAGAACTA TCGCAAGCAA CGATCGTGAT
ATCTATCCAC GAATTATTCA ACCTTCACTT CTCAAAGCTC TTAAATCAGT TTTCTCCCAA
TACGAACTCA TTACGATTGC AACTGAGTGG AATGATATCT CTGCAATCGT TGAACGTACT
GTCGCGGAAG AATTGAACAA GTTTGATTAT GTAGAGGTTA GAAGTCTTGA CCTCACCGGA
CTACAAATCG CCAAAGAATA TCGTGCGGCG ATCGAACAAA AGCAGATTGC AGAGCAGCAA
CTTCTTCGCG CCCAAACTGA GGTGAAGATT GCAGAACAAG AAGCGATCCG TTACGACACC
CTCAATCGCA GCCTTGATGA TCAAGTGTTG TTCAAGCTTT TTATCGACAA GTGGGATGGC
AGAACAGAGG TTGTACCGGC ACTGCCTGGG AGCGCCGGCG GCACCCCTCC AGTCATTGTT
GGGCGTCGAA ATTAA
 
Protein sequence
MQTPRPVNDP ANTVIVLVAI VLSALLLVGQ ALFIVPAGKV AVVTTLGKVS GGSRLPGLNL 
KIPLIQSVNP FDVRTQVRPE EFSTLTKDLQ VIEATATVKY AVRSEEAGRI YRTIASNDRD
IYPRIIQPSL LKALKSVFSQ YELITIATEW NDISAIVERT VAEELNKFDY VEVRSLDLTG
LQIAKEYRAA IEQKQIAEQQ LLRAQTEVKI AEQEAIRYDT LNRSLDDQVL FKLFIDKWDG
RTEVVPALPG SAGGTPPVIV GRRN