Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1765 |
Symbol | |
ID | 3743405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1695678 |
End bp | 1698377 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637771956 |
Product | DNA topoisomerase I |
Protein accession | YP_377766 |
Protein GI | 78185331 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.125266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCACA CCCTCGTCAT CGTTGAAAGC CCTACGAAGG CCCGCACCAT TCGCGGCTTC CTTCCAAAGG GATTCAAGGT CGAGGCATCC ATGGGCCATG TCCGGGATTT GCCTAACAAC GCCAGCGAAA TTCCTGCTGC AGCAAAGGGC CAAAAATGGG CCAACCTCGG GGTGAACACC GAGGCTGAAT TTGAGCCGCT GTACGTGGTT CCGAAGGACA AAAAGAAAAT TGTCCGAGAA TTAAAAGATG CTCTGAAAGG CGCCGATCAG TTGCTCCTGG CCACGGATGA AGACCGGGAG GGAGAAAGCA TCAGCTGGCA CCTGCTTCAG CTTTTGGCCC CCAAGGTGCC CGTGAAGCGC ATGGTGTTTC ACGAGATCAC CAAAGAGGCC ATTGGCAAGG CGCTGGATCA GACCAGGGAC CTCGACATGG AGCTGGTGCA CGCTCAGGAA ACCCGTCGGA TTCTCGACCG CCTCGTCGGT TACACGCTGT CACCGCTGCT TTGGAAAAAA GTGGCCTGGG GCCTCTCTGC CGGACGGGTT CAATCCGTTT CGGTGCGTCT TCTCGTGCAG CGTGAACGGG CTCGACGGGC TTTCTGCAGT GGCAGCTATT GGGATCTAAA AGCCAAGTTG GAGCAGGGTG GTCGGGGATT TGAAGCGAAG CTCACCCACG TTGCTGGACG GCGGATTGCC AGCGGTAGTG ACTTTGACGA GAGCACCGGC GGCTTGAAAT CTGGAGCCAA TGTGCAATTG CTTCAGGAAA GTGAGGCCAG GGCTTTGGCC GACAAAGTTC AGCAGAGTCC TTGGACGGTG GATGCGGTGG AAGAAAAGCC GACCGTGCGC AAGCCGGTTC CTCCTTTCAC GACCAGCACG CTTCAGCAGG AGTCCAACCG CAAGTTGCGC CTCTCGGCTC GGGAAACCAT GCGTTGCGCT CAAGGCCTGT ATGAGCGCGG CTTCATCACC TACATGCGGA CGGATTCCGT TCATCTCTCC GACCAGGCCA TTAGTGCATC AAGGAGCTGC GTCCAAAGCC TTTATGGCAA GGATTATTTG AGCCCCGGAC CACGTCAATT CAGCACGAAG GCACGCAATG CCCAAGAAGC ACATGAGGCG ATTCGTCCTG CGGGAGAAAG CTTTCGTACC CCTGGAGACA CCGGTCTCGA TGGTCGTGAT CTGGCGTTGT ATGAGTTGAT TTGGAAGCGA ACCGTCGCCA GTCAGATGGC TGAGGCGAGG CTCACGATGC TCTCAGTGGA TTTGAGCTCA GCTGACGCGA GTTTCCGAGC CAATGGCAAG CGCATCGATT TTCCTGGGTT TTTCCGGGCT TATGTCGAGG GAAGTGATGA TCCCGACGCC GCTTTAGAAG GGCAAGAGGT GTTGCTGCCG TCCCTCGCGA TCGGGGATAA GCCTCAGCCA AAAGATGTGG ATGCCTTGGG ACATCAAACC CAGCCGCCCG CTCGATTTAG CGAGGCGTCG TTGGTGAAAA TGTTGGAAAA AGAAGGCATT GGACGACCAT CCACCTATGC CTCGATCATT GGCACCATCG TTGATCGTGG CTACGCAACG ATTCAAGGCA ATGCCTTGAC CCCGAGCTTT ACCGCTTTTG CTGTAACAGC CCTGTTGGAG GAGCATTTCC CCGACCTGGT GGACACCAGC TTCACGGCTC GGATGGAGAA CACCCTCGAT GAGATCTCCC ACGGCAAGGT GCAGTGGCTC CCTTATCTCG AAGGCTTCTA CAAGGGCGAA GAAGGCCTTG AAACCCAAGT GCAACAGCGG GAGGGGGACA TTGATCCAGG CGCCTCCCGA ACGATTGATC TGGAGGGACT GACCTGCGTT GTTCGCATTG GTCGGTTTGG CGCTTACCTC GAATCGAAGC GGGTGAGTGA CGACGGTGAG GAGGAGTTGA TCAAGGCAAC ACTTCCCCGC GAAATCACCC CAGCGGATCT GGATCAAGAT CAAGCTGAAT TAATCCTCAA ACAGAAAGCG GATGGACCTG AGGCCTTAGG GGAAGATCCG GAAACGGGCG ACTTGGTTTA CCTGCTCTTC GGCCAATACG GCCCCTACGT CCAGCGTGGG CAGGTCAGTG ATGAAAATCC CAAGCCCAAG CGCGCCTCGC TGCCAAAAGG CGTCAAGCCT GAAGATCTCA AGCTCGACGA CGCTTTGGGT CTGTTGCGGT TACCGCGGCT TTTGGGAGAG CATCCCGATG GTGGTCGTAT CCAGGCTGGC CTCGGTCGTT TTGGCCCCTA CGTCGTTTGG GATAAGGGCA AAAGCGAGAA GGATTACCGC TCCTTAAAGG GGGAAGACGA CGTGCTGATG GTTGGGCTTT CCAGGGCTTT GGAGCTCTTG GCGATGCCCA AACGTGGCCG CGGCGGAAGG ACGGCCCTGA AAGACTTGGG CAAGCCAGAG GGAAGTGAGG AGACCATCCA GGTCTATGAC GGTCCCTACG GCTTGTATGT CAAGCAGGGC AAGGTGAATG CGTCGCTGCC GGAAGGCAAG GGCGCTGAAG ACGTCACCCT TGAAGAAGCC GTCGAATTGT TGGCAGCGAA GGCCTCAGCC AAGAAGGCCA GCCGTAAATC AACGGCGAAG AAACCGGCGG CGAAGAAGCC TGCAGCCAAG AAACCTGCAG CGAAAAAGGC CCCAGCCACA ACAAAAACGG GTCGGCTTCG GGCGAGTGCC GTGCGGGTGA TTAAGCCGGG AAATAGCTAA
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Protein sequence | MAHTLVIVES PTKARTIRGF LPKGFKVEAS MGHVRDLPNN ASEIPAAAKG QKWANLGVNT EAEFEPLYVV PKDKKKIVRE LKDALKGADQ LLLATDEDRE GESISWHLLQ LLAPKVPVKR MVFHEITKEA IGKALDQTRD LDMELVHAQE TRRILDRLVG YTLSPLLWKK VAWGLSAGRV QSVSVRLLVQ RERARRAFCS GSYWDLKAKL EQGGRGFEAK LTHVAGRRIA SGSDFDESTG GLKSGANVQL LQESEARALA DKVQQSPWTV DAVEEKPTVR KPVPPFTTST LQQESNRKLR LSARETMRCA QGLYERGFIT YMRTDSVHLS DQAISASRSC VQSLYGKDYL SPGPRQFSTK ARNAQEAHEA IRPAGESFRT PGDTGLDGRD LALYELIWKR TVASQMAEAR LTMLSVDLSS ADASFRANGK RIDFPGFFRA YVEGSDDPDA ALEGQEVLLP SLAIGDKPQP KDVDALGHQT QPPARFSEAS LVKMLEKEGI GRPSTYASII GTIVDRGYAT IQGNALTPSF TAFAVTALLE EHFPDLVDTS FTARMENTLD EISHGKVQWL PYLEGFYKGE EGLETQVQQR EGDIDPGASR TIDLEGLTCV VRIGRFGAYL ESKRVSDDGE EELIKATLPR EITPADLDQD QAELILKQKA DGPEALGEDP ETGDLVYLLF GQYGPYVQRG QVSDENPKPK RASLPKGVKP EDLKLDDALG LLRLPRLLGE HPDGGRIQAG LGRFGPYVVW DKGKSEKDYR SLKGEDDVLM VGLSRALELL AMPKRGRGGR TALKDLGKPE GSEETIQVYD GPYGLYVKQG KVNASLPEGK GAEDVTLEEA VELLAAKASA KKASRKSTAK KPAAKKPAAK KPAAKKAPAT TKTGRLRASA VRVIKPGNS
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