Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1742 |
Symbol | ispD |
ID | 3742152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1675384 |
End bp | 1676064 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637771933 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_377743 |
Protein GI | 78185308 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATCTGT TAATTGCTGC GGCGGGGAGT GGTCGCCGCA TGGGTGCGGA TCGAAACAAG CTGCTGTTGC CTCTTTTGGG GCGGCCTTTG ATCGCTTGGA CAGTGGATGC AGCGTTGACG GCCACTGAAA TTAGTTGGAT TGGAATCGTT GGCCAGGACA TCGATCGAGC CGAGATCCTG GATGCTCTTG GCTCAGTGAA GAAACCTTTG GTTTGGATTC AAGGGGGGGC GACCCGCCAG GAATCCGTGC TGCGGGGTCT GGCCGGACTG CCAGAGGGGG CACGCCATGT GCTGATTCAT GACGGTGCCA GGTGTTTGGT TCAACCAGAC CTTTTTGATC GGTGTGCCGT GGCTGTGGAG GCTGGGGCGG CATTGATTGC TGCAACCCCA GTGACCGACA CCATTAAGCG GGTGGATGAA CACGGCATGA TCCGTGACAC GCCTGATCGT GCTGAGCTTT GGGCTGCACA AACTCCGCAA GGGTTTGAGG TGGAGCAGCT TCGTCAGGGT CATGTGAGAG CTCAAGCGGA GGGGTGGAGC GTGACGGACG ATGCATCGCT CTTTGAGCGT TTGGGCTGGT CGGTGCAGGT GCTGGATGCT GGCCCTTCGA ACATCAAGGT GACCACCCCC TTTGATCTCA CGGTGGCTGA AGCAGTTCTC AGTTCAAGGA CGACACCCTG A
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Protein sequence | MHLLIAAAGS GRRMGADRNK LLLPLLGRPL IAWTVDAALT ATEISWIGIV GQDIDRAEIL DALGSVKKPL VWIQGGATRQ ESVLRGLAGL PEGARHVLIH DGARCLVQPD LFDRCAVAVE AGAALIAATP VTDTIKRVDE HGMIRDTPDR AELWAAQTPQ GFEVEQLRQG HVRAQAEGWS VTDDASLFER LGWSVQVLDA GPSNIKVTTP FDLTVAEAVL SSRTTP
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