Gene Syncc9902_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1659 
Symbol 
ID3743937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1608140 
End bp1608805 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID637771851 
Productpeptidase S26A, signal peptidase I 
Protein accessionYP_377661 
Protein GI78185226 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAGCA AAGTCAGTGC CATATGGGAG TTCTGGGCTC CATTCCTATT CACTGTTTCC 
ATCTATCTTC TGATTCGGCA GTTTGCCTTT GAGGCGCGGT ATATCCCATC GGGATCGATG
CTTCCAGGCC TGCAGGTCGG CGACAAATTG ATCGTTGAAA AGCTTTCCTA CAAAGCAAAG
CCGCCCCGCC GAGGCGACAT CGTTGTGTTC AATTCACCGA CTGCATTTGA CCCGGTTTGG
ATGCTAGATG CCGGCCGCCC GGATCCCTTG AAGTGTGGAT TAGTCACCTT CCCAGGGGTG
AGCTGGGTTG TCGATCGGGT GCTTTTGCAG CGTTATCCAG AGTGCGAAGC ATGGATTAAG
CGTGTCGTTG GCGTGCCTGG TGATGTCATC GAGGTGAATG CTCAAGGGCA GGTATCGATT
AACGGCAAGC GTTTTGAGGA GTCCTACGTC TCTAATTACT GCATAACCGG TAGCGGGATG
CCCGGTTGCA AGGGGCTGTA TGCATCAGTT CCGAAGGGCA AGGTGGTGGT TCTTGGCGAT
AACCGCAGGA ACAGTCAGGA CGCCCGCCGT TGGCCAGGTG GACCCTTCCT CCCCGATGAT
CAAATCATTG GCCGTGCCGT GTTTCGGTTC TGGCCTCCGG CTCGTATTGG CCCCCTCAGC
GATTAA
 
Protein sequence
MSSKVSAIWE FWAPFLFTVS IYLLIRQFAF EARYIPSGSM LPGLQVGDKL IVEKLSYKAK 
PPRRGDIVVF NSPTAFDPVW MLDAGRPDPL KCGLVTFPGV SWVVDRVLLQ RYPECEAWIK
RVVGVPGDVI EVNAQGQVSI NGKRFEESYV SNYCITGSGM PGCKGLYASV PKGKVVVLGD
NRRNSQDARR WPGGPFLPDD QIIGRAVFRF WPPARIGPLS D