Gene Syncc9902_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1602 
Symbol 
ID3741856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1550521 
End bp1551846 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content58% 
IMG OID637771792 
Productchloride channel 
Protein accessionYP_377604 
Protein GI78185169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC GACACTCAGG CCAACACCTC GCTCACCCTC CACTGATCAA CAAACTTCTG 
ATCGATCAAC TGCGCTTCAG CCTGATGGCG TTGTTCGCCG GCGCAGCAAG TGGGGCGGGC
GTGGCATTGA TCATCAGCCT GATTGATCTC GCCACACGAC AGCTTTGGGG AGGTCCGGTT
GAACAGGCCC TCGGACAAGC TCCACCCTTG GCTTGGTCGG TGTTGGTCTG CGGGGGCTTT
GGATTGCTTC TCTCGTTCAT TCATCGCGGT GGTTCCTCCA CCTTGCTGCC CGAACTCCCA
GAAACCATGG AGGACTTGCG TCATCCAGAC CGGGCACCAA AACGAGACGA GCGCAGGGCC
ATTCTTGGGG CTGCCCTCGC CCAGATCGGT GGTGGCAGCA TTGGCCCAGA AGCCCTAATG
ACGCGACTTG CGACATTGAT CAGTCGTCGA ATGTGGAAAG GCAACGATCA AGCTCTGCAG
TCAGCCTCTG TGGCCGGAAG CTTGGGATTT CTCGGCGCCC CTCTCTTGGG AGGCATGGTG
GTCGGTGAGC GGAAACAAGA CGTTCTTCGC CGTTGGATCC CTGGAATTCT GGGGGGGCTT
AGTGGTTTTG TTGCTTTCCA CGGCATCAAT GAAGCCAGCG GTGGGTCCCT CAAAAACTTG
CCCTACGTCT GGCCCTCCAA CATTGGGGAA AGTTTCGACA CTCTTGTTGC AGCGTTGCTA
GCCGGAGCAG TCGGTTGCGG GTTGGGACTC ATCTTCCAAA GGTGGCGTTA CTGGCTAGAA
CAACGGCGGC TCATGGCGCG CTGGTGCTGG TGGCCTGTAG TCACCGGAGT GCTGCTAGGT
GCCTTGATGC ATTGGCTTCC CCTCGTGCCT TTTGGCGGGG AAGAGCAGAT GCGGCCTCTG
CTGGAAAACC AACAAAGCCA TCCCTCCGCA CTGCTGTTCT TATCCGCCTT CGGCAAACTG
TTGATGCTGG GCCTTTGCCT TGAAACAGGC TGGCGTGGTG GGATCTTTTT CCCTGTTTTT
TTGATTGCCT GTGCCACCGG CACGGGGCTC CATCAAATCT TTCCCGACCT GGGCAGCCTC
GGCAGCTGGT GCGGAGGGCT CACGGGCGCC TTTTATCGCA TTCTTTTGCC TTCACCACTG
GTGGTTGTTG TGCTGGGCTT GGCTTTACTT CAGGGGCATG GGGCTAGTGG TCTGCTGGTG
GGAGTCGCCA TGGCTCACCT GATCAAGCAG GGGACAAGCC TGGGTGATGT CCCTCCACCT
CCCCAGCGAA CACTCGACTC GCACGAATGT CCGAAGCCTC AATGGTCATC AAGTCGTCCT
TTGTAA
 
Protein sequence
MNQRHSGQHL AHPPLINKLL IDQLRFSLMA LFAGAASGAG VALIISLIDL ATRQLWGGPV 
EQALGQAPPL AWSVLVCGGF GLLLSFIHRG GSSTLLPELP ETMEDLRHPD RAPKRDERRA
ILGAALAQIG GGSIGPEALM TRLATLISRR MWKGNDQALQ SASVAGSLGF LGAPLLGGMV
VGERKQDVLR RWIPGILGGL SGFVAFHGIN EASGGSLKNL PYVWPSNIGE SFDTLVAALL
AGAVGCGLGL IFQRWRYWLE QRRLMARWCW WPVVTGVLLG ALMHWLPLVP FGGEEQMRPL
LENQQSHPSA LLFLSAFGKL LMLGLCLETG WRGGIFFPVF LIACATGTGL HQIFPDLGSL
GSWCGGLTGA FYRILLPSPL VVVVLGLALL QGHGASGLLV GVAMAHLIKQ GTSLGDVPPP
PQRTLDSHEC PKPQWSSSRP L