Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1602 |
Symbol | |
ID | 3741856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1550521 |
End bp | 1551846 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637771792 |
Product | chloride channel |
Protein accession | YP_377604 |
Protein GI | 78185169 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGC GACACTCAGG CCAACACCTC GCTCACCCTC CACTGATCAA CAAACTTCTG ATCGATCAAC TGCGCTTCAG CCTGATGGCG TTGTTCGCCG GCGCAGCAAG TGGGGCGGGC GTGGCATTGA TCATCAGCCT GATTGATCTC GCCACACGAC AGCTTTGGGG AGGTCCGGTT GAACAGGCCC TCGGACAAGC TCCACCCTTG GCTTGGTCGG TGTTGGTCTG CGGGGGCTTT GGATTGCTTC TCTCGTTCAT TCATCGCGGT GGTTCCTCCA CCTTGCTGCC CGAACTCCCA GAAACCATGG AGGACTTGCG TCATCCAGAC CGGGCACCAA AACGAGACGA GCGCAGGGCC ATTCTTGGGG CTGCCCTCGC CCAGATCGGT GGTGGCAGCA TTGGCCCAGA AGCCCTAATG ACGCGACTTG CGACATTGAT CAGTCGTCGA ATGTGGAAAG GCAACGATCA AGCTCTGCAG TCAGCCTCTG TGGCCGGAAG CTTGGGATTT CTCGGCGCCC CTCTCTTGGG AGGCATGGTG GTCGGTGAGC GGAAACAAGA CGTTCTTCGC CGTTGGATCC CTGGAATTCT GGGGGGGCTT AGTGGTTTTG TTGCTTTCCA CGGCATCAAT GAAGCCAGCG GTGGGTCCCT CAAAAACTTG CCCTACGTCT GGCCCTCCAA CATTGGGGAA AGTTTCGACA CTCTTGTTGC AGCGTTGCTA GCCGGAGCAG TCGGTTGCGG GTTGGGACTC ATCTTCCAAA GGTGGCGTTA CTGGCTAGAA CAACGGCGGC TCATGGCGCG CTGGTGCTGG TGGCCTGTAG TCACCGGAGT GCTGCTAGGT GCCTTGATGC ATTGGCTTCC CCTCGTGCCT TTTGGCGGGG AAGAGCAGAT GCGGCCTCTG CTGGAAAACC AACAAAGCCA TCCCTCCGCA CTGCTGTTCT TATCCGCCTT CGGCAAACTG TTGATGCTGG GCCTTTGCCT TGAAACAGGC TGGCGTGGTG GGATCTTTTT CCCTGTTTTT TTGATTGCCT GTGCCACCGG CACGGGGCTC CATCAAATCT TTCCCGACCT GGGCAGCCTC GGCAGCTGGT GCGGAGGGCT CACGGGCGCC TTTTATCGCA TTCTTTTGCC TTCACCACTG GTGGTTGTTG TGCTGGGCTT GGCTTTACTT CAGGGGCATG GGGCTAGTGG TCTGCTGGTG GGAGTCGCCA TGGCTCACCT GATCAAGCAG GGGACAAGCC TGGGTGATGT CCCTCCACCT CCCCAGCGAA CACTCGACTC GCACGAATGT CCGAAGCCTC AATGGTCATC AAGTCGTCCT TTGTAA
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Protein sequence | MNQRHSGQHL AHPPLINKLL IDQLRFSLMA LFAGAASGAG VALIISLIDL ATRQLWGGPV EQALGQAPPL AWSVLVCGGF GLLLSFIHRG GSSTLLPELP ETMEDLRHPD RAPKRDERRA ILGAALAQIG GGSIGPEALM TRLATLISRR MWKGNDQALQ SASVAGSLGF LGAPLLGGMV VGERKQDVLR RWIPGILGGL SGFVAFHGIN EASGGSLKNL PYVWPSNIGE SFDTLVAALL AGAVGCGLGL IFQRWRYWLE QRRLMARWCW WPVVTGVLLG ALMHWLPLVP FGGEEQMRPL LENQQSHPSA LLFLSAFGKL LMLGLCLETG WRGGIFFPVF LIACATGTGL HQIFPDLGSL GSWCGGLTGA FYRILLPSPL VVVVLGLALL QGHGASGLLV GVAMAHLIKQ GTSLGDVPPP PQRTLDSHEC PKPQWSSSRP L
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