| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1574 |
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| Symbol | |
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| ID | 3741985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1521706 |
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| End bp | 1523784 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771763 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_377576 |
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| Protein GI | 78185141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.53157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCGCA CCCGTCTCCA TTGGGCCCTT ATCGCAGGAA CAGCAGCGGC TGTTGGCGTC
GGCGCAGCCC TAGGAACCCG TGCGGTCACG CAACTGGTTG ATTCGACGCT TCCCGATGCA
CGGGGAATCG CCAGTTTTAA TCGACCCGGA ACCATCACGC TGCTCTCGTC CCAGGGCAAG
ATCATCCAGA AATTGGGTCC TGCGACTCGA GAAAAGATCA AGCCGGGCGC CATGCCGCCA
TTGGTTCAAA ACGCTTTTAT CGCTGCGGAA GACCGCCGGT TCTTTCAGCA CGATGGCGTC
GACGCTTGGG GCATTGCACG GGCGGCGGTC ACCAACGTGC GACAGGGTGC CGTGCGTGAG
GGGGCGAGCA CGATTACCCA ACAATTGGCT CGGATCGTTT TTCTGAGCCA AGACCGCACC
ATTACGCGCA AACTGAAGGA AGCCGCTCTG GCACTGAAGC TTGAGCGGCA ACTCAGTAAG
CAACAAATCC TCGAGCAATA TCTGAACTAC GTGTATCTGG GCTCCGGTGC CTACGGCGTT
TCAGATGCAG CATGGATTTA CTTCTCAAAA ACCACCGATC AACTAACGGT TGCTGAGGCT
GCATTGATCG CGGGGCTCCC ACCCGCTCCG TCGATCTATT CACCCTTGGT GAATCCAGAT
TTAGCCCGAA AGCAGCGGGC TTTAGTGCTT GATCGCATGG CCCAGTCGGG AGCGATTAGC
CGCGTGGAAG CGGAACGAGC AAGCGCCTCT CCCCTCGCTC TGAAGCCGGC CACACCCAAG
TATTTCAACA GCTCCGCTCC GTACTTCACC ACCTGGGTGG CTCAGGAATT ACCCAAGCTG
GTGACCCCAG AACAACTGGA AGTGGGCGGG ATCAAGGTGA GAACCAGCTT GAACCTTGAC
TGGCAAATAA AAGCTCGCGA TGTGATCCTC AAAAACGCCC CGTTCGATAC CGAGGGCGTC
ATGGTGTCGA TCGAACCGGG CACCGGACTT GTTCGCGTGA TGGTGGGAGG GCGCGACTTT
TACGAGAGTC AGTTCAACCG AGCCACCTTG GCGTTGCGCT CGCCGGGCTC CACTTTCAAG
CTGTTCCCCT ACGCCACAGC CATCGACCTG GGCGTTAAAC CGGAAACCAT TGTTCTCGAT
AAGAAGCGCT GCTGGAATGG ATATTGCCCG AAAAATTTTG GCAATAAGTA TTACGGGAAG
GTGTCGCTTG CGAATGCGCT GAAGAACTCC CTCAACACCG TGGCTGTGCA ATTACAAGAC
ATCGTGGGGT TCGACGCCAT CATCGAAACC GCCAACAAAT TTGAGATCGG CACCCAACGC
CCCCTCGGCA AGTACTACCC GATGGCGATT GGTGCCTATG AGCAAACCGT GTTGGATATG
GCCGCGGCCT ATGCCGGTGT TGCCAACCGT GGCGTCTTCG TTAAACCCAG TCCCTTTGAA
GAAATCCGAG GGCCGGAAGG CAACATTCTC TGGAGCCGTC GGGTGGATGG AGACCGGGGA
CGGCGGGCTC TCGACAGTGA TGTTGCCGAT GCGATGAATT GGATGTTCCA GCGCGTGGTA
ACTGGAGGAA CCGGCATCGC AGCAAAAATG GATGATCGTC AGGTGGCCGG CAAAACAGGC
ACCTCAGAGG GTGCACGGGA TCTGTGGTTC ATCGGTTCCA TCCCCCAACT CACCACCGCC
GTTTGGTTCG GCTATGACGA CAACCGTGAA ACCAAAAGCA ACAGCGGCGA GGCGGCATGG
GCTTGGAAAC AATTCATGCT TCAAATCGAA GCGGAAGTCC CCGTTCAGGA ATTTCCGCCA
AAGCCTGAGC TGAATCGTCC ATGGCGAGTG CCTGGCAGGA AGAAACCGAA GAAAACCGAC
AAAAAGGCTG CCTACCTCGG CTATGAGCAC GAGAAAGAAT CTCCGGAACA GCTCGACGCC
CCAGCTGGGA GTGCATTTCC ATCAACAGGC ATGCCATTCC CTCCGGAGTT TGCACCGCCT
GCACCGGTTC CATCCCCGAG AGAGAGCCAA GCACCTGCTG CAAGCCCACA ACGAAATTGG
ATGAAGCCAC GCATTCAGGA GCGGCGCTGG ACCCGCTGA
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| Protein sequence | MNRTRLHWAL IAGTAAAVGV GAALGTRAVT QLVDSTLPDA RGIASFNRPG TITLLSSQGK
IIQKLGPATR EKIKPGAMPP LVQNAFIAAE DRRFFQHDGV DAWGIARAAV TNVRQGAVRE
GASTITQQLA RIVFLSQDRT ITRKLKEAAL ALKLERQLSK QQILEQYLNY VYLGSGAYGV
SDAAWIYFSK TTDQLTVAEA ALIAGLPPAP SIYSPLVNPD LARKQRALVL DRMAQSGAIS
RVEAERASAS PLALKPATPK YFNSSAPYFT TWVAQELPKL VTPEQLEVGG IKVRTSLNLD
WQIKARDVIL KNAPFDTEGV MVSIEPGTGL VRVMVGGRDF YESQFNRATL ALRSPGSTFK
LFPYATAIDL GVKPETIVLD KKRCWNGYCP KNFGNKYYGK VSLANALKNS LNTVAVQLQD
IVGFDAIIET ANKFEIGTQR PLGKYYPMAI GAYEQTVLDM AAAYAGVANR GVFVKPSPFE
EIRGPEGNIL WSRRVDGDRG RRALDSDVAD AMNWMFQRVV TGGTGIAAKM DDRQVAGKTG
TSEGARDLWF IGSIPQLTTA VWFGYDDNRE TKSNSGEAAW AWKQFMLQIE AEVPVQEFPP
KPELNRPWRV PGRKKPKKTD KKAAYLGYEH EKESPEQLDA PAGSAFPSTG MPFPPEFAPP
APVPSPRESQ APAASPQRNW MKPRIQERRW TR
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