Gene Syncc9902_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1559 
Symbol 
ID3742302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1508004 
End bp1508741 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID637771748 
Producthypothetical protein 
Protein accessionYP_377561 
Protein GI78185126 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGACCC CGGAAATCCC TATAAATGAA GCAGAACGCC TGAAAGCACT CAGTGAATAC 
AGGATTCTTG GAACGAAACC GGAACAAACC TACGACGACA TTACAAAAAT AGCTTCTCTC
ACCTGCGACA CACCAATCGC TCTGCTCAGC CTGGTCGATA CCAATCGCCA ATGGTTCAAA
TCAAAAGTGG GCGTTGATGT CGAAGAAACA GTACGAGACT GGTCATTCTG TGCCCATGCG
ATTCACTCCC CTGAGCCATT AATTATTGAA GACGCACTAC AGGATGAACG TTTCGTCGAT
AATCCGCTGG TAAAAGGAGA CCCTCAGATC AGACTCTATG CAGGTTTTCC CTTACAGAAT
GATCAAAACC ATCGCATTGG AACCCTTTGC GTCATTGATC GTAAGCCCCA TGGCCTCACA
GATGTTCAGT GCGAAATCAT GGAATCACTG GCAAGGCAAG CGGTTTCTTT TCTTGAGTTA
AGGAAGAGAT CAATCAAGCT CATTGAATCT TTTTGCTCTC TAACAGATGC AGGAGGAATT
ATTAGTACTT GCTCTTACTG CCGCAAGGCA AAGGATACGA GCGGACACTG GATGCATCTC
GATAAATACT TATCATCTCG CACAAACTTA AACTTCAGCC ATGGCATCTG CGATACATGC
ATTGAAGAAC ATTTTCCCGA TGTTCTTCAA ACATGGAGAG CAGAAGAGAA AGCCAATACA
AAAGAAACGG CAATCTAA
 
Protein sequence
MKTPEIPINE AERLKALSEY RILGTKPEQT YDDITKIASL TCDTPIALLS LVDTNRQWFK 
SKVGVDVEET VRDWSFCAHA IHSPEPLIIE DALQDERFVD NPLVKGDPQI RLYAGFPLQN
DQNHRIGTLC VIDRKPHGLT DVQCEIMESL ARQAVSFLEL RKRSIKLIES FCSLTDAGGI
ISTCSYCRKA KDTSGHWMHL DKYLSSRTNL NFSHGICDTC IEEHFPDVLQ TWRAEEKANT
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