Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1545 |
Symbol | panB |
ID | 3742288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1495285 |
End bp | 1496097 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637771733 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_377547 |
Protein GI | 78185112 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.887856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCCT TCGACCTGAT CCGTTTCAAG CAGAGCGGAC GCCCAATCAC CATGCTGACG GCTTGGGATT GCTTGTCGGC TGCCCTCGTT GAGGCGGCTG GGGCCGACGT GGTTTTGGTG GGTGATTCGT TGGGGATGGT GGCGCTGGGC CATGCCACAA CGCTGCCAGT CACCCTCGAT CAAATGCTGC ATCACACCCT GGCTGTAGCC AGAGGGTTTA CGGCATCCCA TGACCAGCAG CCGCTGCTCG TTTGTGACTT GCCCTTCCTT AGCTATCAAT GCGGTCCAGA CCTTGCTGTG GCTGCCGCAG GAAAACTGCT CAAAGAATCC TCCGCAGCGG CGGTGAAACT AGAGGGAGCA GATCCCGAGA TCGTGGCTGT GGTGGACCGG CTAGTGCGAA TGGGCATCCC GGTCATGGGT CACTTGGGCC TGACGCCTCA AGCGGTGCAT CGTTTGGGGT ACCGACGCCA AGCCCTGGAT CCAGTGAGTC AAGACCGGCT GATCGAACAG GCCTTGACCC TGGAAAAAAC AGGTTGTTTT GCCCTCGTGC TGGAGCATGT CCCCAGTGAG CTGGCCGCGC GAGCAAGGCA TGAGCTCGGA ATTCCTGTGA TTGGCATTGG CGCCGGAGAC GACTGCGATG GGCAGGTCCG TGTCACAGCA GATCTCTTGG GCCTGACCCC ACATCAACCT CCATTCAGCC CCCCCCAATT GAATGGACGC CAGCTTTGTA TTGAGGCCCT CAGGGGCTGG ATACAGGAGC ACCAGAGCAG CTCTCCCACC ACAGCACCAC CTCAAGCAGA ACCCGATTGC TGA
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Protein sequence | MRPFDLIRFK QSGRPITMLT AWDCLSAALV EAAGADVVLV GDSLGMVALG HATTLPVTLD QMLHHTLAVA RGFTASHDQQ PLLVCDLPFL SYQCGPDLAV AAAGKLLKES SAAAVKLEGA DPEIVAVVDR LVRMGIPVMG HLGLTPQAVH RLGYRRQALD PVSQDRLIEQ ALTLEKTGCF ALVLEHVPSE LAARARHELG IPVIGIGAGD DCDGQVRVTA DLLGLTPHQP PFSPPQLNGR QLCIEALRGW IQEHQSSSPT TAPPQAEPDC
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