Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1483 |
Symbol | |
ID | 3742363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1434641 |
End bp | 1436530 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637771668 |
Product | peptidase M41, FtsH |
Protein accession | YP_377485 |
Protein GI | 78185050 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.45624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGCGT GGGCTATGCC GATCCGTCAG GACGACAACC AACCGAACCG TCGTTTCGGA ATCATCAACC TGGTGTTAAT CGGCTTTGGA GTGTTGCTGC TAGTGAGCAG TTTCATCCCA AGCAACGGTA TGCAGCAGGT GCCGAGGGTT CCTTATTCGT TGTTCATCGA CCAAGTGAAT GATGGCGCCG TAAAACGGGC GTTCATCACG CAAGATCAAA TTCGCTACGA GTTGTCGGCC CCGGAGGAGG GAACACCTCC TGTGTTGGCC ACAACGCCGA TTTTCGATAT GGATCTCCCC CAACGCCTTG AGGCAAAGGG AGTTGAGTTC GCTGCAGCGC CCCCGAAAAA ACCAAATATT TTCACCACGA TTTTGAGTTG GGTGGTCCCA CCACTGATTT TTATCTTGGT TCTGCAATTC TTTGCGCGTC GCTCGATGGG CGGTGGTGCT CAGGGAGCCC TCAGTTTCAC CAAGAGCAAA GCAAAGGTTT ACGTCCCGGA TGAAGAGTCA CGCGTCACCT TTGCTGATGT GGCTGGGGTG GATGAAGCAA AAGACGAACT TACTGAAATC GTTGATTTCC TCAAAACTCC TGAGCGCTAT GCAGAAATTG GAGCCCGTAT TCCCAAGGGT GTTTTGTTAG TTGGCCCTCC TGGTACTGGC AAAACATTGC TCTCCAAGGC TGTTGCTGGT GAAGCAGAAG TTCCCTTCTT TATTATTTCC GGCTCAGAAT TTGTAGAACT CTTCGTTGGT GCGGGTGCCG CTCGCGTTCG TGATTTGTTC GAAGAGGCCA AGAAAAAAGC CCCTTGCATC ATCTTTATCG ACGAACTTGA TGCCATCGGT AAGAGTCGTT CTGGCTCGAT GGGAGTTGTC GGTGGAAACG ACGAGCGCGA ACAAACGCTC AACCAATTGC TCACGGAGAT GGATGGTTTC GCGGCCCAGG ACAAACCCGT CATCGTTCTT GCGGCGACCA ACCAACCCGA GGTTCTCGAT GCGGCTCTGT TGCGTCCCGG TCGCTTCGAT CGTCAAGTCC TAGTCGACCG TCCAGATCTT TCCGGTCGTA AAACAATTTT GGAGATCTAC GCCAAGAAAG TGAAATTGGC TGAAGGAGTT GACCTCGACA GCGTGGCGCA AGCCACCAGT GGATTTGCTG GTGCTGATCT AGCCAACCTT GTGAATGAGG CCGCCCTGCT AGCAGCTCGA GTAAAACGCA CTCGAGTTGA GCAGCAGGAT TTAGGTGAAG CCATCGAGCG TGTTGTCGCT GGCTTGGAGA AGAAGAGTCG TGTGCTTCAG GATGATGAGA AAAAAGTCGT GGCTTATCAC GAAGTTGGCC ACGCCATCGT TGGTCACCTG ATGCCGGGTG GCAGCAAGGT TGCCAAGATT TCAATCGTTC CTCGGGGCAT GAGTGCCTTG GGTTACACCC TTCAACTCCC CACAGAAGAA CGGTTCCTCA ATTCCAAGGA AGATCTTCAG GGCCAAATCG CCACGCTGTT GGGTGGCCGC TCGGCAGAGG AGATTGTTTT CGGAAAAATC ACCACTGGTG CGGCGAATGA TCTTCAGCGG GCCACAGATC TCGCGGAGCA AATGGTTGGG ACCTATGGGA TGAGCGACAC CCTTGGACCG TTGGCCTACG ACAAACAGGG GGGAGGACGT TTCCTTGGCG GCAATAACAA TCCCCGCCGA TCTGTGAGTG ATGCCACAGC CCAAGCGATC GACCATGAAG TGCGGGGTCT AGTGGATAAA GCCCACGACG ATGCCCTGTC GATCCTGCGT CAAAACATGG GACTTCTTGA AACCATTGCT CAGAAGATTC TCGAGAAAGA AGTGATTGAG GGCGACGATC TGAAACAGAT GTTGGAGGCG AGTGTTCTTC CGGAAGGCGT TAGCGCTTGA
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Protein sequence | MQAWAMPIRQ DDNQPNRRFG IINLVLIGFG VLLLVSSFIP SNGMQQVPRV PYSLFIDQVN DGAVKRAFIT QDQIRYELSA PEEGTPPVLA TTPIFDMDLP QRLEAKGVEF AAAPPKKPNI FTTILSWVVP PLIFILVLQF FARRSMGGGA QGALSFTKSK AKVYVPDEES RVTFADVAGV DEAKDELTEI VDFLKTPERY AEIGARIPKG VLLVGPPGTG KTLLSKAVAG EAEVPFFIIS GSEFVELFVG AGAARVRDLF EEAKKKAPCI IFIDELDAIG KSRSGSMGVV GGNDEREQTL NQLLTEMDGF AAQDKPVIVL AATNQPEVLD AALLRPGRFD RQVLVDRPDL SGRKTILEIY AKKVKLAEGV DLDSVAQATS GFAGADLANL VNEAALLAAR VKRTRVEQQD LGEAIERVVA GLEKKSRVLQ DDEKKVVAYH EVGHAIVGHL MPGGSKVAKI SIVPRGMSAL GYTLQLPTEE RFLNSKEDLQ GQIATLLGGR SAEEIVFGKI TTGAANDLQR ATDLAEQMVG TYGMSDTLGP LAYDKQGGGR FLGGNNNPRR SVSDATAQAI DHEVRGLVDK AHDDALSILR QNMGLLETIA QKILEKEVIE GDDLKQMLEA SVLPEGVSA
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