Gene Syncc9902_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1481 
Symbol 
ID3742361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1432938 
End bp1433561 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content59% 
IMG OID637771666 
Productpeptidase S24, LexA repressor 
Protein accessionYP_377483 
Protein GI78185048 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.939319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCCA ACCCCCAGGA GGCTCTGACC TCCGCACAGC AGGAGTTGTA CGACTGGCTG 
TCCGATTACA TCGGCACCCA TCGCCATAGC CCTTCGATAC GTCAGATGAT GCAAGCCATG
GGCTTGCGTT CTCCCGCTCC AGTACAGAGC CGGCTTCGTC ATTTGCAGCA GAAAGGTTGG
ATCACTTGGC AAGAAGGGCA AGCTCGAACG CTGCAATTGC TCGGTGATGT GGCGGCATCA
GTTGGTATTC CCGTTTTAGG CGCTGTGGCG GCGGGTGGTT TGGTCGACAC CTTTGACGAT
GTGCAAGATC ATCTAGACCT TGCTCCCGTC TTGGAAACAC GCGGCTTGTT TGCCCTCACC
GTGAACGGTG ACTCCATGGT GGACGCGCAT ATTGCCGATG GTGATGTGGT GTTGATGGAG
CCCGTGGTCG ACCCGCAACG CCTCAGGGAT GGCACGGTGG TGAGTGCATT GGTGGCTGGC
AGCGGCACCA CGCTCAAACA TTTCCATCGC CAGGGCCCCA CCGTTGTGCT GGAGGCAGCT
AATCCGGCCT ATTCCCCGAT TGAGTTGCCA GCGGAACAGG TGCAAGTCCA AGGGAAGCTC
GTCGCTGTCT GGCGCCAGGT TTAG
 
Protein sequence
MAANPQEALT SAQQELYDWL SDYIGTHRHS PSIRQMMQAM GLRSPAPVQS RLRHLQQKGW 
ITWQEGQART LQLLGDVAAS VGIPVLGAVA AGGLVDTFDD VQDHLDLAPV LETRGLFALT
VNGDSMVDAH IADGDVVLME PVVDPQRLRD GTVVSALVAG SGTTLKHFHR QGPTVVLEAA
NPAYSPIELP AEQVQVQGKL VAVWRQV