| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1411 |
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| Symbol | |
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| ID | 3742121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1377753 |
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| End bp | 1380986 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637771600 |
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| Product | exodeoxyribonuclease V, RecC subunit |
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| Protein accession | YP_377419 |
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| Protein GI | 78184984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.577344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGACCC TCTATCGCAG CAACCGCGCT GAATTCCTCG CTCAATTGCT GGCTCAGCAA
CTGATTGACC AGCAACCGGG ACCGTTGGAA ACGCTGGAGG TGATGGTGAA CACCTGGCCC
ACCAGCCGCT GGTTGGGCGA ACAGCTTGCG GTAGCAAATG GAATTAGCTC GTTGGTTCGC
TTCCCTTTTC CGGGTAGTCG ATTTCGAGAG TTGGTTCGTC AGGTTTTAGA TCTTCCCCCG
AAGGAAGCCG ATCCTTGGCG CGCCAATCAA TTGGTCTGGT CTGTACTGGA ACTCCTCCCG
GAGTTGCTCG AGCAGCCAGC CGCCCTGCCA CTGAAGCGTT GGTTGGATGG TCGGGAGGGA
GGTGGCCAAT CCCAAGCCCT CAGTCGTGAT CGCTGGCAGC TGGCCCGGAT GATCGCTGAT
GCCTTCGACG ATTACGCCCT CTATCGCGCT GATCAATTGG GTCAGTGGAG TGCGTCCCCA
TCATCAGCGG AGACCGATTG GCAACCACTG CTTTGGCGTC GTTTGGCGGA TCAGCTGAAC
CGCCCGCCCT TTGGCCTGCA GGTCCGTGAC GCCATCGATC GATTGCGGCG GGGTGCGGTA
TCCGCTGATT CTCTTCCTGA GCGATTGCGT TTGTTTGGAA TCAGTGCCCT AGCCCCCGTG
CAAGTGGACC TGATTCAGGC CCTCTCGGGT GTTCTTGATG TGGAGGTGTA TCTCCTGACG
CCTTGCCCCG ATCTATGGCA ACGCTGTGGA AGCCGTCGAG AGCTGCTCCA GGAGGCTTGG
TTGGAGCCCC CAGATGGACA TTGGCTTGAG GCGGCACCGA GGCTGGAAGC CAGTTTTGGC
CGTATGGGGG CTGAGTTCCA GCAATTGTTG GAGGGGTCGG GTGATGTTCA GTTGGGTGAG
CGGCGCGAGG GAGATCTTTT TGCATCACCG GTGCAGATGG CTGCAGCATC CACGGGCTCT
CCATCTCTCC TGGAACAGCT GCAAGAGCAG CTTGTTGATC CGGAGCAGTC GGGAGGACTG
CTCCGGTTAG CCAATGATCA ATCGCTCTTA TTCCAAGCAG CCCCTGGACC TTGGCGAGAG
GTGCAGCTGG TGCGGGATCG GATCCTCCAG TGGCTCGCTG CGGATCCAGA CCTCGCTCCG
CGTGATGTTC TGGTGATGAC GCCGCAGGTG GATCGTTATG CCCCGTTGCT GAATTCAGTC
TTTAACGATG CCGATGCCAT TGGTGTTGAT CTCCCCTGGC GTCTCACTGA CCGCACTCAG
CAAAGCAGTC CTGGACTGTC AATGGCCATG CTCAACCTGC TGGAGTTGGC GGCTGGTCGT
TTAACGGCTA CCGGCTTAGA GCAATGGTTG GCCAACCCTG CTCTTCAGGA ATTACAGGGG
TTGTCGTCCG AAGACTGCAC CTTGATGACG CGGGTTTTGC AGCACACCGG TTTCCGTTGG
GGGCTCGATG CAAAGGAACG GGGTGGAGAC GAAACCCATG GGTTGCGCTG GTGTTTAGAC
CGCTGGCTTT TGGGCCTGGT GTTGCCTGTT CGTGATGGAT TAGCCCCTGC GGGTGCGGCA
CCGTTCCAGT GGGAGTTGGA TCCGGAGCGC TTGGTGCGGT GGTGGACCCT GCTGGATCGA
TTGGCTCGGA TGCTCGAGCA GTTCAGGCGA CCTCAGACCT GTGCTGCATG GGTGGCGTTG
CTGCAGTCGG TGTTGCAGGA ATTGTTTGGG GATGGCCGCG CTTGGAGTGG TGAATTACAA
ACCTGGACCG CAGCCCTAGA AGACTGGCGA TTGCGGGCCA CCGATTGCGC GCTGGAGCTT
GATATCGCCG TTGTCTTGGA GGTGCTTAAT GAAGCCCTGT CGGTGGATAG CGGTCGTTTC
GGGCACCGCA CTGGTTCGCT CACCATCAGC GCCTTGGAAC CGATGCGGGC CATCCCCCAC
AAGGTGATTG TGTTGATGGG GCTCGATGGC GCCGTGTTCC CACGTCCCAA TCAACGCCCA
GGCTTCCATC TTCTTGAACA ACACCGTCGG CTTGGTGATC CCCGCGGTAG TGATCAAGAC
CGGTACGTCT TATTAGAGGC GTTGATGTCA GCACGACGCC ATCTATTGAT CAGTTGGTGT
GGTCGGAATG AACGCACCGG TGAGGCCCAA CCCCCTGCGG CTCCTGTGGA GCAATGGTTG
GCCCAACTCC AGCAGGAGTT GTCCACCAGC AGCACCGACG GTTTGGTGCT GACGCCAGCT
GCCAACCCTT TGGCGCGTAG CAACTTTCAA ATCGAGACCC CTTTGAGTTG CGATCGCCGT
CAGTTGGAGG CCCGCCGCTG GTTGGATCGT TCTCGACCGG AACCAAAACA AGCCCTGGCG
TGGCCCCTGG CCTGGACGTT CCCTCAGGCG GACCCAGGGA CCAGTTCCAA GCCAGAGAAG
CCGTTGGTGT TTGAAGAGCT CCTGCGCTGG ATGCATCAAC CCCAGGCGGC TTGGTTGCGT
TCGAAGGGGC TGCGACCGGG TGAGGGGATT GATGCAGTGG AGGATCTCGA CCCCCTCGAG
CTCAATGCCC TCGAGCGTTA TCAGCTGTTG GATCAAAACC TGGAACCGTT GCTTGCCGCC
GGAGAGTTGC CGAATTGGCG GTCGCTGCTG GCCGGTCAGG GGGTGCTGCC GGCTGGAGCT
GGCGCCGCCC TAGAGCAACA GGAGTTGGCA GACCGTTGGC AACGCCTCAG ACGTCAGCTC
GACAGCCTCG GCCCTTGCCG TCGCGAGGAC ATCGTGATTG AAGGTGTTCT CCGACCGCTT
GTATTCGCTG GGGAAACCCA AGTCGTGGTT CAGGCGGGAA TGCTCAGTGC GAGGGGTGTG
ATGCGTGGTT GGCTTCAACA TCTCCACCTT TGCCGGTTGA TGCCAACCCC CACGGCGGTA
ATTGCCCGCA GTACCCGTGC CATCGGTGCG GAAATTCACC TGCACTGGAT GGCGTTGCCA
GCGGACCAGG CGGAGCAGCA GCTGGTCACG CTGCAAGGAC TAGCTCATCA GGGGATGCAT
CAGTGCTGGC CCATTCCCCC TAAAAGTGGT TGGCAGATGG TTTGGCATGA GCAGCGCAAA
CCAGGGACAG GCATGGATCG TTTTCGAACG TGTTGGCAAG AGGAGCGCCT TTCGCCTGCG
CTTCAGCTTT GTTTCGGAGC GGAGCTGGAG GCGGATGCGC TGTTGCAGAC ACCGGGCTTC
GATGAAGCCT GTTCGGCGCT GTATCAACCC CTGTTTCAAG CGCGGCGGAG TTGA
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| Protein sequence | MLTLYRSNRA EFLAQLLAQQ LIDQQPGPLE TLEVMVNTWP TSRWLGEQLA VANGISSLVR
FPFPGSRFRE LVRQVLDLPP KEADPWRANQ LVWSVLELLP ELLEQPAALP LKRWLDGREG
GGQSQALSRD RWQLARMIAD AFDDYALYRA DQLGQWSASP SSAETDWQPL LWRRLADQLN
RPPFGLQVRD AIDRLRRGAV SADSLPERLR LFGISALAPV QVDLIQALSG VLDVEVYLLT
PCPDLWQRCG SRRELLQEAW LEPPDGHWLE AAPRLEASFG RMGAEFQQLL EGSGDVQLGE
RREGDLFASP VQMAAASTGS PSLLEQLQEQ LVDPEQSGGL LRLANDQSLL FQAAPGPWRE
VQLVRDRILQ WLAADPDLAP RDVLVMTPQV DRYAPLLNSV FNDADAIGVD LPWRLTDRTQ
QSSPGLSMAM LNLLELAAGR LTATGLEQWL ANPALQELQG LSSEDCTLMT RVLQHTGFRW
GLDAKERGGD ETHGLRWCLD RWLLGLVLPV RDGLAPAGAA PFQWELDPER LVRWWTLLDR
LARMLEQFRR PQTCAAWVAL LQSVLQELFG DGRAWSGELQ TWTAALEDWR LRATDCALEL
DIAVVLEVLN EALSVDSGRF GHRTGSLTIS ALEPMRAIPH KVIVLMGLDG AVFPRPNQRP
GFHLLEQHRR LGDPRGSDQD RYVLLEALMS ARRHLLISWC GRNERTGEAQ PPAAPVEQWL
AQLQQELSTS STDGLVLTPA ANPLARSNFQ IETPLSCDRR QLEARRWLDR SRPEPKQALA
WPLAWTFPQA DPGTSSKPEK PLVFEELLRW MHQPQAAWLR SKGLRPGEGI DAVEDLDPLE
LNALERYQLL DQNLEPLLAA GELPNWRSLL AGQGVLPAGA GAALEQQELA DRWQRLRRQL
DSLGPCRRED IVIEGVLRPL VFAGETQVVV QAGMLSARGV MRGWLQHLHL CRLMPTPTAV
IARSTRAIGA EIHLHWMALP ADQAEQQLVT LQGLAHQGMH QCWPIPPKSG WQMVWHEQRK
PGTGMDRFRT CWQEERLSPA LQLCFGAELE ADALLQTPGF DEACSALYQP LFQARRS
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