| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1407 |
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| Symbol | |
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| ID | 3742117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1370207 |
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| End bp | 1372081 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771595 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_377415 |
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| Protein GI | 78184980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.721389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC AGCAGCAGCA GCACGAGGAT CCCTCGTGCG CAGTTGATCT TTCCGCATCT
GCATTGCCAG AAGACAAAAA AGAAGTCGAC CAAGAAGAAG TTTTAACCAC CACAATCGAG
TCATCCACCG CCGAGCCATC CACAACTGAG GCGTCCACAA CCGAGGTCAC GGCAGAGGTC
ACGGCCGATG AGGCCAAATC AGAGCCTCAA TCCGGATTTG ACGGTTTTGG CTTCAGTGAA
GCTCTCCTCA AAACCCTCGC AGACAAGGGC TACAGCGACC CCTCACCGAT CCAAAAGGCA
GCGTTTCCGG AACTGATGTT GGGCCGCGAC CTTGTCGGTC AGGCTCAAAC CGGTACCGGT
AAGACAGCGG CCTTTGCATT GCCTCTGCTG GAACGTCTGG AGAGTGGCCA GAAGACCCCC
CAAGTGTTGG TGCTGGCTCC CACAAGGGAA TTGGCGATGC AGGTGGCTGA TTCCTTCAAG
GCCTATGCCG CTGGTCATCC CCACTTAAAA GTTCTGGCTG TCTACGGCGG CACGGATTTC
CGCTCCCAAA TCAGCACGTT GCGACGGGGC GTTGATGTGG TGGTGGGAAC GCCAGGCCGT
GTGATGGATC ACATGCGCCA GGGCACCCTC GACACATCTG GGCTCACGAG CTTGGTGCTC
GATGAAGCCG ATGAGATGTT GCGTATGGGC TTCATCGACG ACGTGGAGTG GATCCTTGAG
CAGCTGCCTA AGGAACGACA GGTGGTTTTG TTCTCGGCAA CGATGCCTCC CGAGATTCGT
CGCTTGTCAA AGCGTTATCT CAACGATCCA GCTGAAGTCA CCATCAAAAC CAAAGATCAA
GACGGAAAGC TGATTCGGCA ACGGGCGATC ACCGTGCCGA TGAGCCACAA GCTTGAGGCC
TTGCAACGGG TGTTGGATGC TTGTGGGGGA GAGGGTGTGA TCATTTTTGC TCGCACCAAA
GTGATCACGC TGACGGTGGC TGAAACCCTG GAGGCTGCAG GGCATCAGGT GGCTGTTTTA
AACGGCGATG TTCCCCAAAA CCAACGGGAA CGCACCGTGG AACGCTTGCG CAGCGGTTCT
GTTGACGTTT TGGTCGCCAC GGACGTGGCA GCCCGAGGTT TGGATGTGGA GCGGATTGGT
CTTGTGATCA ATTACGACAT GCCCTTCGAT AGCGAGGCTT ATGTGCACCG CATCGGTCGG
ACAGGTCGGG CAGGCCGCAC CGGTGAAGCG GTGTTGTTCA TGACGCCGCG GGAACGTCGG
TTTATTCGAA ATCTCGAGAG AGCGACTGGT CAACCGATCG AGATGATGGA AGTGCCTGGT
AATACGGCAA TCAACCAGGG TCGTTTGGAT CGATTGCGGA AACGACTCAG TGAGGCGGCC
AATGGTGTTG CAGGTAATTC CGAGGAAGGG GCACTCATCC AAGAACTGAT GCAGCGGGTG
GCGACGGAGC TGCAACTCAC GCCAGAACAA ATTGCTTTGG CGGCTCTCAA CCTGGCCATT
GGTCCGAATG GCCTGTTGCG TAAAGGTGAT GACGACTGGA TTCAGAACAC CCAGCGGATG
GACCGTGACC GTGGTGATCG CGGCGATCGT GGGGAACGCC GTGAACGTCG GATCGACCGA
CCGGCACGGG CTCCTGAAGA AGACATGCAG CGCTACCGCG TTGCTGTTGG TCACCGTGAT
CGGGTGAAAC CCGGCAATCT TGTGGGTGCA ATTGCCGGTG AAACCGGTTT ACAAGGCCGC
TCAATTGGTC GAATTCAAAT CTTTGACAAT CACAGCCTTG TGGATCTCCC AAAGGGCATG
CCAGAGGACA TTTTCAATAG TTTGCGCACC CTTCGTGTGA TGAATCGTGA GTTGCAAATC
ACCCAAGATT CTTGA
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| Protein sequence | MTEQQQQHED PSCAVDLSAS ALPEDKKEVD QEEVLTTTIE SSTAEPSTTE ASTTEVTAEV
TADEAKSEPQ SGFDGFGFSE ALLKTLADKG YSDPSPIQKA AFPELMLGRD LVGQAQTGTG
KTAAFALPLL ERLESGQKTP QVLVLAPTRE LAMQVADSFK AYAAGHPHLK VLAVYGGTDF
RSQISTLRRG VDVVVGTPGR VMDHMRQGTL DTSGLTSLVL DEADEMLRMG FIDDVEWILE
QLPKERQVVL FSATMPPEIR RLSKRYLNDP AEVTIKTKDQ DGKLIRQRAI TVPMSHKLEA
LQRVLDACGG EGVIIFARTK VITLTVAETL EAAGHQVAVL NGDVPQNQRE RTVERLRSGS
VDVLVATDVA ARGLDVERIG LVINYDMPFD SEAYVHRIGR TGRAGRTGEA VLFMTPRERR
FIRNLERATG QPIEMMEVPG NTAINQGRLD RLRKRLSEAA NGVAGNSEEG ALIQELMQRV
ATELQLTPEQ IALAALNLAI GPNGLLRKGD DDWIQNTQRM DRDRGDRGDR GERRERRIDR
PARAPEEDMQ RYRVAVGHRD RVKPGNLVGA IAGETGLQGR SIGRIQIFDN HSLVDLPKGM
PEDIFNSLRT LRVMNRELQI TQDS
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