| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1377 |
|---|
| Symbol | |
|---|
| ID | 3742881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1336762 |
|---|
| End bp | 1337505 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637771561 |
|---|
| Product | pseudouridine synthase, Rsu |
|---|
| Protein accession | YP_377385 |
|---|
| Protein GI | 78184950 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGTC AAAGGCTTCA AAAATTGATG GCCGCTGCCG GGCTGTGTTC ACGTCGGCGC
GGAGAAGATT GGCTTCAAGC TGGTCGCGTA ACGGTTGATG GGCGTGTTGC GAGCCTCGGG
GATCAGGCCG ATCCCAATTC TCAGCTGATT GAGGTGGATG GCGTTCCCTT GATTTCAGTT
CAAGAACCAC GCGTGTTCTT GCTTAACAAG CCAGTCGGGG TGATTTGTAG TTGTCGTGAT
CCTCAAGGCC GGGCCACGGT TTTGGATTGT CTGCCCCATC AAGAACGCTC AGGTCTGCAC
CCTGTTGGGC GACTGGATGC TGATAGTCGT GGCGCTCTTC TGCTAACTGA TCAAGGTGAA
CTGACGCTGC GGTTGACCCA TCCCCGCTAC AACCACGCCA AGACCTATCG CGTTTTGGTC
AGAGGGATTC CCAGTTCGCA AGCCCTTCGT CGTTGGCGAG ATGGCTTGCT GTTAGATGGA
CGCCTGACTC GACCAGCTCG CGTGCATTGT CTTCGGTCAC GCGGCGCATC ATCGTTATTG
GAAGTTGAGC TCAAAGAAGG CCGCAACCGC CAAATTCGAC GGGTGGCTGA GTTGCTTGGT
CATCCTGTGA TCGATTTGCA GCGGGTTGCC ATTGATGGCA TTCGTCTCGA TGATTTGGCC
GAGGGCTGTT GGCGCCGTCT TGACGCGAGA GAGTGGAGCA CCATCTTGGT TGGGAACGCA
CCTCGGTCCA TGGACCCATC ATGA
|
|---|
| Protein sequence | MTRQRLQKLM AAAGLCSRRR GEDWLQAGRV TVDGRVASLG DQADPNSQLI EVDGVPLISV
QEPRVFLLNK PVGVICSCRD PQGRATVLDC LPHQERSGLH PVGRLDADSR GALLLTDQGE
LTLRLTHPRY NHAKTYRVLV RGIPSSQALR RWRDGLLLDG RLTRPARVHC LRSRGASSLL
EVELKEGRNR QIRRVAELLG HPVIDLQRVA IDGIRLDDLA EGCWRRLDAR EWSTILVGNA
PRSMDPS
|
|---|
| |