| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1329 |
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| Symbol | |
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| ID | 3743153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1286931 |
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| End bp | 1288280 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637771512 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
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| Protein accession | YP_377337 |
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| Protein GI | 78184902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.48852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCA CTGTTCGTCA GCTGATCGCC TGCTGGGGAG CTCCGTTGGG GCCAACTCCA
GACCCTGATA TGGCCCTCGG TCGGATCTGC ACCGATAGTC GCTCGCTCCA AACCGGTGAC
TTTTTTGTGC CCCTCGTTGG CGAGAATTTT GACGGCCACA GCTTCCTAGG CCAGTTGTCA
GCTCTCGGAG CCCAGGCCGC TGTGGTGGAG CAGTCCTGGT CGGATCCCTT GCCATCGGAT
CTGTTGCACT GGCGCGTTGA CGACACCCTG AAGGCCTACC AGCAGTTGGC TTTGCTGCAT
CGCCGTTCGC TGGATCAGCC CCTGGTCGCG GTGACTGGTT CAGCGGGAAA AACCACCACC
CGTGAATTGA TTCGTGCCGC CCTGGCCCCC CTGGGTGATG TGCACTGCAG CGAGGGAAAC
AACAACAACG ACATTGGCGT TCCGCTCACC GTGCTGTCCG CGGATTCCCA CCATTGCGCC
TTGGTGATTG AAATGGGCAT GCGTGGTCCT GGTGAAATTG AACGCTTGTC GCGCTGCACC
GAGCCGGATG TGGCGGTGAT CACCAACATC GGCACAGCCC ACATCGGCCG TCTTGGCAGC
CGGGAGGCGA TCGCCGCCGC GAAATGTGAA ATCACAGCCG CCCTGAAATC CGATGGTGTG
GTGGTGATCC CAGCCGGTGA TGCTTTGCTC GAGACAGCCC TCTCGAAGGT GTGGAGTGGC
CGTGTTGTGC GGGTTCGGTT GGCGGACGAC ACCCCTGTAG CGGCTGATTG CATCGGTGCC
ATCGACGCTG GCCAGCTTGA GGTTGGTGCG CATCGCCTGC CATTGCCCTT GGAGGGGCGC
CACAACGCCC GTAATGTTTT GCTGGCCCTG GCGGTGGCAG ACCAGCTTGG TGTTGATAGC
GCCTCCCTCA ACGCGATGGA GGTGTCGGTG CCGGGTGGGC GCAATCGCCG CTTGGTTCAA
GGGGGACTCA CCCTTCTCGA CGAGACCTAC AACGCCTCCC CTGAAGCGGT CATGGCCGCC
CTCACGCTGT TGTCGTCCCA GCCTGGTCGG CGGTTTGCAG TCCTCGGAAC GATGCTCGAG
TTGGGAGCGC AAAGCCTGCA GCTTCACGCT GACGTGGCAA CGCAGGCTGC AGCGCTGAAG
CTGGATGGGT TGGTGGTGGT GGATGGTGGT GCTGAGGGGC GGGCGATGGC GAACGCTGCC
GCTGGTTTGC CCCGTCTTGC TGTGGTGTCT TCTCCGGAGG ACGCTGCAAA ACCCTTAAAG
GAATGGCTCA GGCCCGGGGA TGTGGTGTTG CTGAAGGCCA GCCGCGGTGT GGCGCTTGAG
CGGCTGCTTC CCCTGTTGCC GTCGTTCTAG
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| Protein sequence | MTITVRQLIA CWGAPLGPTP DPDMALGRIC TDSRSLQTGD FFVPLVGENF DGHSFLGQLS
ALGAQAAVVE QSWSDPLPSD LLHWRVDDTL KAYQQLALLH RRSLDQPLVA VTGSAGKTTT
RELIRAALAP LGDVHCSEGN NNNDIGVPLT VLSADSHHCA LVIEMGMRGP GEIERLSRCT
EPDVAVITNI GTAHIGRLGS REAIAAAKCE ITAALKSDGV VVIPAGDALL ETALSKVWSG
RVVRVRLADD TPVAADCIGA IDAGQLEVGA HRLPLPLEGR HNARNVLLAL AVADQLGVDS
ASLNAMEVSV PGGRNRRLVQ GGLTLLDETY NASPEAVMAA LTLLSSQPGR RFAVLGTMLE
LGAQSLQLHA DVATQAAALK LDGLVVVDGG AEGRAMANAA AGLPRLAVVS SPEDAAKPLK
EWLRPGDVVL LKASRGVALE RLLPLLPSF
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