| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1311 |
|---|
| Symbol | |
|---|
| ID | 3743213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1269189 |
|---|
| End bp | 1269902 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637771494 |
|---|
| Product | methionine sulfoxide reductase A |
|---|
| Protein accession | YP_377319 |
|---|
| Protein GI | 78184884 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.518036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCTT CCTGGCTGTC TCCCGGCGGC AGTGACGAGC AAAAAAATGC TTCGGTCCAT
GCCGTGTTGG GGACACCTCT TCGGGCTCCA CTGTTGGACG ACCAAGAGGA AGCGGTGTTT
GCCTGCGGAT GTTTTTGGGG CGCCGAAAAG GGTTTTTGGC GCTTACCAGG TGTGGTTAGT
ACGGCTGTGG GCTATGCCGG CGGAAACGTT GAAAATCCCT CCTACAACCA GGTGTGTTCA
GGACGCACTG GCCACACGGA AGTTGTTCGG GTGGTTTGGA GCAGCCCAGC GATCGATTTC
AGCGATCTCC TGAAATTGTT TTGGGAATGC CATGACCCAA CCCAAGGGAA TCGCCAAGGC
AATGACACAG GCAGCCAATA CCGCTCAGCG ATCTACACCA CAACTGAGCA GCAATTGCTC
CTCGCCAATG CGAGTAAAGA GGCCTACCAA GTTGAATTGA ACCAGCGCGG TTTCGGAGCG
ATCACCACCG AAATCTTGGC GGATCAACAG TTTTTCTTTG CCGAGGAATA CCACCAGCAG
TACCTCGCCA AGCCTGGCAG CCGCCCCTAC TGCTCAGCGA TGCCGACGCA GGCATTGCTG
GCGGATTTTT CTGGCGCTGC CTACAAACTC CCAAACAAGG TGTGGGACAA CTACGACTGG
AGCATTCAGC ACTGCGTTCT TCGCGGCGAC AACAGCCCAA TTTCGCTCCA TTGA
|
|---|
| Protein sequence | MLPSWLSPGG SDEQKNASVH AVLGTPLRAP LLDDQEEAVF ACGCFWGAEK GFWRLPGVVS
TAVGYAGGNV ENPSYNQVCS GRTGHTEVVR VVWSSPAIDF SDLLKLFWEC HDPTQGNRQG
NDTGSQYRSA IYTTTEQQLL LANASKEAYQ VELNQRGFGA ITTEILADQQ FFFAEEYHQQ
YLAKPGSRPY CSAMPTQALL ADFSGAAYKL PNKVWDNYDW SIQHCVLRGD NSPISLH
|
|---|
| |