Gene Syncc9902_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1291 
Symbol 
ID3742372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1247863 
End bp1248306 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID637771473 
Productputative SOS mutagenesis protein UmuD 
Protein accessionYP_377299 
Protein GI78184864 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCTTGG CCTTGAACTT CCAGCGCATC CCGCGACCGC TACACGCCAG CCGGCCGCAG 
CAGATCCTCC CTTTGGTGAG CGAGCGCGTT CCAGCCGGGT TCCCGTCCCC GGCCGACGAT 
TACGTGGAGA TGGGCATTGA CCTCAATGAG CAATTAATCC GCCATCCCGG CAGCACCTTT 
TTCTTGAAAG TGAGCGGCGA ATCGATGACG GAAGCCGGCA TCCATGACGG CGACTTGCTG 
GTCGTCGACC GCAGCCTCGA CCCACGGCCC GGACGCGTCG TCGTAGCCGT GCTGGACGGG 
GCCTTCACGC TGAAACGCTT GGCCCGTCAT CACGGGCGTC TCCGACTGGA AGCGGCCCAT 
CCGGACTACC CACCTTTGGA ACTCCAACAC TGCAGTGATG TGCAGATCTG GGGCATCGCC 
ATTTATGTCA TCCATCCCCT CTGA
 
Protein sequence
MVLALNFQRI PRPLHASRPQ QILPLVSERV PAGFPSPADD YVEMGIDLNE QLIRHPGSTF 
FLKVSGESMT EAGIHDGDLL VVDRSLDPRP GRVVVAVLDG AFTLKRLARH HGRLRLEAAH 
PDYPPLELQH CSDVQIWGIA IYVIHPL