Gene Syncc9902_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1270 
Symbol 
ID3743289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1233039 
End bp1233440 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content52% 
IMG OID637771450 
Productputative anti-sigma regulatory factor (serine/threonine protein kinase) 
Protein accessionYP_377278 
Protein GI78184843 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTTC ATCGATTCCG CTGGGCAGAC TTTGTTTTGC CGTCCACTCT CCAGCTGGCT 
CCCCTCTTGG AGCTTCTGGT TGAACCTGTC GGCTGTGAAA CGACTAGTCA GAAGGTTGAA
CTTGGCTTAC ACGAAGCATT GGTCAATGCT GTGCGTCATG GAAATTCCGA AAATCCCCAA
AAACAACTCC GCGTTCGACG AATCCTTACG CCCAATTGGT TGATTTGGCA GGTGCAAGAT
GAGGGCTGTG GATTGCCACC AACGGCTCGA GCCTCTGAGC TTCCTTTGTC TGTGGATGCC
CAGCATGGAC GTGGCTTGTT TCTGATTCAT CAATGTTTTG ATGATGTTCG TTGGAGCCGT
CGTGGAAATC GGCTTCAACT CGCCTGTCGC CGTCCCGCTT AG
 
Protein sequence
MPFHRFRWAD FVLPSTLQLA PLLELLVEPV GCETTSQKVE LGLHEALVNA VRHGNSENPQ 
KQLRVRRILT PNWLIWQVQD EGCGLPPTAR ASELPLSVDA QHGRGLFLIH QCFDDVRWSR
RGNRLQLACR RPA