Gene Syncc9902_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1214 
Symbol 
ID3741806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1175551 
End bp1176099 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID637771394 
Producthypothetical protein 
Protein accessionYP_377222 
Protein GI78184787 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAC TCACTGTTTA CTGCGGCTCC TATTCAGGAA ATCATCGGTG TTATGTAGAA 
GCGGCCCAAC GGCTTGGCAC CTGCCTTGCT GAACGGAAGA TCACCCTTGT CTACGGGGGG 
GCTCAAATTG GACTGATGGG AGCATTGGCC GATTCTGTTC TCGGAGCAGG CGGTGATGTC 
GTTGGAATCA TTCCCAAACC ACTCAATCAA GCCAACCTTG TTCATCAAGG ACTCACGCGC 
TTAGAAGTTG TGGATTCGAT CCAACAACGC AAGTCCAGGA TGCTGGAGTT AGGTGATGGT 
TTGATGGCCT TACCGGGAGG CTTTGGCACC TTGGAAGAGC TATTTGAAGC TCTGGCCTGG 
TGTCAATTGA AGTTGCATCA AAAGCCTTGT GCCGTTCTCA ATGTCAACGG CTACTACGAC 
CCATTGTTGT CGTTCCTGGA TCAAGCCACA AATCAAGAGT TTTTGTCGAC GGCCAATCGC 
AATTTGTTGC TTCAAGCTGC AACACCTGAA GATCTGCTCG CTTTGATGAT GCAGCAAAGT 
AATGACTAA
 
Protein sequence
MQALTVYCGS YSGNHRCYVE AAQRLGTCLA ERKITLVYGG AQIGLMGALA DSVLGAGGDV 
VGIIPKPLNQ ANLVHQGLTR LEVVDSIQQR KSRMLELGDG LMALPGGFGT LEELFEALAW 
CQLKLHQKPC AVLNVNGYYD PLLSFLDQAT NQEFLSTANR NLLLQAATPE DLLALMMQQS 
ND