Gene Syncc9902_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1199 
Symbol 
ID3743238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1161153 
End bp1161824 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID637771379 
Producthypothetical protein 
Protein accessionYP_377207 
Protein GI78184772 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.105724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCA TACCTGAGCC GGAGCTCATG ACTGCCCACG AACAGGTGGA TGCTTACGCG 
GATGCTGATT TCAGCAGTGG TGATTCCAGA ACGGTTGCCT TAATTGAACA ATTGCTGGAT 
GAGACAGGTC CGCTGCCAAA GGATCCTCTG ATTGTCGACC TCGGCTGTGG CCCAGGGAAC 
ATCACCATTC GTTTGGCCGA GTTGTTGCCA AACGCCCAGG TGATTGGGAT TGATGGTTCC 
GAGCCGATGC TTGCGGTGGC CAAGCGACGT TCCATTCGTA CTTCAAACAA CTTGAAGTTC 
ATCCGCCTTC AACTGCACGA AATCGAAGTT GAACTCAAGG ATTTGGCAGA TTTGGTGGTG 
AGTAACAGCT TGTTGCACCA CCTCAAGAAG CCCGATCTGC TTTGGTCTGT AACGCAATCG 
ATTGCCAAGC CTGGTTGCCG CGTCTTGCAC CGAGATTTGC GACGTCCAAC GAGTCTGGCT 
GAGGTGCATC GCCTGCAGCA GCAACACTTG CCTAAAGCAC CGTCGGTTTT GATTCAGGAC 
TTCACCGCGT CTCTCGTGGC CGCATACACC ACGGATGAGG TCGATCAGCA ATTGCGTCGT 
GCTGAGATGA AATGCGCCAA GGCATGGTCT GAGGACGATC GATATCTGGT GGTGTCAGGC 
TTAGTGGGTT GA
 
Protein sequence
MQRIPEPELM TAHEQVDAYA DADFSSGDSR TVALIEQLLD ETGPLPKDPL IVDLGCGPGN 
ITIRLAELLP NAQVIGIDGS EPMLAVAKRR SIRTSNNLKF IRLQLHEIEV ELKDLADLVV 
SNSLLHHLKK PDLLWSVTQS IAKPGCRVLH RDLRRPTSLA EVHRLQQQHL PKAPSVLIQD 
FTASLVAAYT TDEVDQQLRR AEMKCAKAWS EDDRYLVVSG LVG