Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1107 |
Symbol | |
ID | 3743321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1070111 |
End bp | 1071178 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637771284 |
Product | diaminopimelate epimerase |
Protein accession | YP_377115 |
Protein GI | 78184680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.134817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAGT TCAGCAAATA TCAGGGTCTT GGCAACGACT TCCTGATTCT TGAGGGTCGT CAGGGTCAGC TGGATTTTGC TGTTGCAGAG CCAGACCCCA ACTGGGTTCG TCGAATTTGT GATCGACGCT TTGGTGTGGG TGGTGACGGT GTGATTTTGG CTCTCCCGCC TCAGGCCGAT GGTGATCTGC GGATGCGGAT TTTTAATGCA GATGGCACGG AAGCTGAGAT GTGTGGCAAT GGCATTCGCT GCCTTGCCCG ATATCTGGCT GACACGGATG GAGAGGCTCC AGGTTGCCGA TGGGCGATTG AGACCCCAGC TGGAATGATT CGCCCTGAGT TGATGACGAA TGGACAGTTG CGGGTGGATA TGGGCGCGCC GTTTTTGGAG TCTGCGTCGA TCCCCACCAC CCTTGAACCT TTGGCTGGGC TACCAAGAGG GGCGCTCGAG ATCGATGGAG TTCCTCTCAA TGTTGCATCC GTCGGAATGG GCAATCCCCA TGTGGTGGTT CCGGTCGAAG ACCTAAGCCG AATTCCCTTT GAGGTGTGGG GGGCTGCCTT GGAAGTGCAC CCCGTTTTTC CCGCCAAGAC CAATGTTCAT TTCCTCAAGG TCCATGCCCG TGACCGATTG GAAATACGTG TTTGGGAACG GGGGGCTGGC CCGACCCTCG CCTGTGGCAC GGGTGCCTGC GCCACGCTGG TTGCAGCTGT TCTTCTCGAC CTTGCTGACG AGCAGGCCGA AGTGATGCTT CCTGGAGGAC CTCTGCTGAT TTCTTGGCCT GGGCGTAGTG GATCTGTCTT GATGACTGGG CCCGCTGAAG CCGTGTTCGA TGGGGTAATC ACGCCGGAAT TGGTGCCCGC CCCATCTCCT TCGGAATCGA TGGTTCAAGT TCCCGACGTA AACACTCCTG TCGAGACCCC ATCTCCTGCT TCGCTGGAGG ATGAGGCGGC AGCACTGGCC AAGGTGCAAG CGTTTCTCAA CGACACGTCA TTGGACTCGA TGTTGAACCT GGCCAGCGAT TCTTTAGAGC AGCGCACACG CTCCCGCTTT GAACGTGGTG GAAGCTGA
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Protein sequence | MLQFSKYQGL GNDFLILEGR QGQLDFAVAE PDPNWVRRIC DRRFGVGGDG VILALPPQAD GDLRMRIFNA DGTEAEMCGN GIRCLARYLA DTDGEAPGCR WAIETPAGMI RPELMTNGQL RVDMGAPFLE SASIPTTLEP LAGLPRGALE IDGVPLNVAS VGMGNPHVVV PVEDLSRIPF EVWGAALEVH PVFPAKTNVH FLKVHARDRL EIRVWERGAG PTLACGTGAC ATLVAAVLLD LADEQAEVML PGGPLLISWP GRSGSVLMTG PAEAVFDGVI TPELVPAPSP SESMVQVPDV NTPVETPSPA SLEDEAAALA KVQAFLNDTS LDSMLNLASD SLEQRTRSRF ERGGS
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