| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1005 |
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| Symbol | |
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| ID | 3742713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 980937 |
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| End bp | 982016 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637771179 |
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| Product | chlorophyll a/b binding light harvesting protein PcbD |
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| Protein accession | YP_377013 |
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| Protein GI | 78184578 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACTA ATTCGTACTC TGTGGAAGCA CAATGGTTTG TTTACATGCA ATCCTATGGG
AATTCATCAG TCAGCTATGA CTGGTGGGCA GGAAATTCAG GAGTAGCCAA ACGATCTGGC
TCGTTTATTG CGGCGCATGC CGCCCATGCT GGCCTCATCA TGTTTTGGGC CGGTGCATTC
ACTCTCTTTG AGTTGGCTCG TTACAACAGT GCATTGCCTA TGGGAGACCA AGGATTAATC
CTTTTACCTC ATATGGCGTC TTTAGGATTA GGCCTCGACG CGAGTGCAAC AATTGCCAAT
ACAGAGCCAT ACATTGCAAT TGCAGCCTTT CATTTGGTCT CTTCCGCGGT GTTGGGAGCA
GCAGGTATTT GGCATACGCT CAGAGCCCCG AAAGACTTAT CCGTCGCAGA GGGACGAGCA
CAAAACTTTC ACTTTGAATG GGACGACGCC AAGAAACTCA CATTTATCCT TGGCCATCAT
CTGATCTTTC TTGGATTGGG TGTTATTGCA TTTGTTGAAT GGGCCAAACA CCATGGCATC
TATGACACTG CAATCGGTGC CGTTCGCCAA GTTGAGCCCA ACATTGATCT AGGCATGGTC
TGGGGCTATC AGACGAATTT TCTCTCGATT AGTAGCCTTG AGGACGTGAT GGGAGGACAT
GCCGTTCTGG CTTTCATCCT CACTATTGGT GGGGTTTGGC ATATTATTTC AAGCCCATTT
GGGCCATTCA AAAAGATTTT GATTTATTCC GGTGAAGCAA TCCTGTCTTA TTCACTGGCA
GGGATAGCAC TGATGGGATT TGTGACCAGT ATCTGGTGTG CACAGAACAC TCTGATCTAT
CCGGTTGAGT TTTATGGAGA GGCTTTGAAA CTCAATTTCG CATTCTCCCC ATACTTCAGT
GATACTTCTG CAGTCTTAAA CGATGGACAC ACCGCAAGAG CCTGGTTGGC CAATACGCAT
TTCTATCTGG CATTCTTCTT CCTTCAAGGC CATTTTTGGC ATGCACTACG CAGTATGGGA
TTCAACTTTA AAAGTGTATC TCAAGCATTA GAAACAATGG ATACTGCCAA AGTAAGCTAA
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| Protein sequence | MVTNSYSVEA QWFVYMQSYG NSSVSYDWWA GNSGVAKRSG SFIAAHAAHA GLIMFWAGAF
TLFELARYNS ALPMGDQGLI LLPHMASLGL GLDASATIAN TEPYIAIAAF HLVSSAVLGA
AGIWHTLRAP KDLSVAEGRA QNFHFEWDDA KKLTFILGHH LIFLGLGVIA FVEWAKHHGI
YDTAIGAVRQ VEPNIDLGMV WGYQTNFLSI SSLEDVMGGH AVLAFILTIG GVWHIISSPF
GPFKKILIYS GEAILSYSLA GIALMGFVTS IWCAQNTLIY PVEFYGEALK LNFAFSPYFS
DTSAVLNDGH TARAWLANTH FYLAFFFLQG HFWHALRSMG FNFKSVSQAL ETMDTAKVS
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