| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0943 |
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| Symbol | |
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| ID | 3743042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 933726 |
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| End bp | 934802 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771117 |
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| Product | photosystem II reaction centre protein PsbA/D1 |
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| Protein accession | YP_376953 |
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| Protein GI | 78184518 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCG CAATTCGCAG CGGACGCCAG AGCAACTGGG GATCCTTTTG TGATTGGGTC
ACCAACACCA ACAACCGCAT TTATGTGGGT TGGTTTGGAG TCTTGATGAT TCCTTGCCTG
CTGGCTGCCA CCATTTGCTT CATCATCGCG TTTGTTGCCG CTCCTCCGGT TGACATCGAT
GGCATTCGCG AGCCTGTCGC TGGCTCCTTG ATCTACGGCA ACAACATCAT TTCTGGTGCT
GTTGTTCCTT CCAGCAACGC CATCGGCTTG CACTTCTATC CCATCTGGGA AGCAGCTTCA
CTCGACGAGT GGCTGTACAA CGGCGGTCCT TTCCAGCTCG TCGTCTTCCA CTTCCTCATC
GGCATTTCCG CCTACATGGG TCGTCAGTGG GAACTCTCTT ACCGCTTGGG CATGCGCCCT
TGGATCTGTG TTGCCTACAG CGCCCCGCTG TCTGCAGCGT TTGCAGTCTT CCTCGTCTAC
CCCTTCGGTC AGGGTTCGTT CTCTGATGCA ATGCCCCTGG GCATCTCTGG AACCTTCAAC
TACATGTTGG TGTTCCAGGC TGAGCACAAC ATCCTGATGC ACCCCTTCCA CATGCTGGGT
GTTGCAGGCG TCTTCGGCGG CAGCTTGTTC TCCGCCATGC ACGGCTCACT GGTGACCTCC
TCCTTGGTGC GTGAAACCAC CGAAAGCGAG TCCCAGAACT ACGGCTACAA ATTCGGTCAA
GAAGAAGAGA CGTACAACAT CGTGGCTGCT CACGGCTACT TCGGTCGCCT GATCTTCCAA
TACGCCTCCT TCAACAACAG CCGTAGCCTC CACTTCTTCC TGGGTGCCTG GCCCGTTATC
GGCATCTGGT TTACGTCCAT GGGCATTTCA ACCATGGCCT TCAACCTGAA CGGCTTCAAC
TTCAACCAGT CCATCCTTGA TGGTCAGGGC CGTGTCGTTA GTACTTGGGC CGACGTGTTG
AACCGTGCAG GCCTCGGCAT GGAAGTCATG CACGAGCGCA ACGCTCACAA CTTCCCCCTC
GACCTGGCAG CTGCTGAGTC CACACCTGTG GCACTGCAAG CACCTGCAAT CGGTTGA
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| Protein sequence | MSTAIRSGRQ SNWGSFCDWV TNTNNRIYVG WFGVLMIPCL LAATICFIIA FVAAPPVDID
GIREPVAGSL IYGNNIISGA VVPSSNAIGL HFYPIWEAAS LDEWLYNGGP FQLVVFHFLI
GISAYMGRQW ELSYRLGMRP WICVAYSAPL SAAFAVFLVY PFGQGSFSDA MPLGISGTFN
YMLVFQAEHN ILMHPFHMLG VAGVFGGSLF SAMHGSLVTS SLVRETTESE SQNYGYKFGQ
EEETYNIVAA HGYFGRLIFQ YASFNNSRSL HFFLGAWPVI GIWFTSMGIS TMAFNLNGFN
FNQSILDGQG RVVSTWADVL NRAGLGMEVM HERNAHNFPL DLAAAESTPV ALQAPAIG
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