| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0919 |
|---|
| Symbol | |
|---|
| ID | 3741943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 906292 |
|---|
| End bp | 908586 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637771093 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_376929 |
|---|
| Protein GI | 78184494 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.144042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGCG CTGCGGTCCT CGACTGGATG GTTCAGGACG GCGTACGGCT AGAAAATTGC
CGTCACGACC ACCCCCTTGC GGTGCTGGGA CCTCAGCCCG ATGACCAAGG ATGGACCGTG
CGGGTTTGGA TGCCCGAGGC TCAAAAGGTA ACCCTCCTGC TGGGCAGTCA GGAGATCGTT
ACATCCACAC CAAACCATCC ATGGATTTTT GAGGCTTCGA CACCCTCAGA CCCGGGCAGC
AACTACAAGC TGAGGGTTGA GCGTGGAGGG ATCACCACCG AACAACATGA TCCTTGGGCC
TTCCGCCACG AATGGATGGG AGAGATGGAT CGCCATCTTT TTGCAGAAGG GAATCATCAC
CACATCTGGC AGCGGATGGG TGCACATCTC ACCCAGATCG ATGGCATTAG TGGGGTGATG
TTCTGCCTTT GGGCTCCGAA CGCTCTAACT GCTTCCGTCC TTGGCGATCT CAACTCTTGG
GATGGTCGCC ATCATCCGAT GCAAAAACGG CTCGGAGGAA TCTGGGAATT GTTCGTCCCC
GGACTAGACG CAGGAACTCT CTACAAATAC GAAATTCGCT CCCAGGAAGG GCACTGCTAC
CAAAAAGCTG ATCCCTACGG TTTTCAACAC GAGGTTCGTC CCGACAACAG TTCCGTTGTG
GCACGGCTTG AGGGATACAG CTGGTCCGAC TCCAGCTGGA TGCAGGATCG AGACAGTCGG
AATGCTCTCG ACCAACCGAT CTCTGTGTAT GAGATGCACA TCGGAAGCTG GATTCATGCT
TCTGCTGACG AGCCTTGGAT CCAACCGGAT GGCCAACCGC GGGCACCCGT TCCCGCGGCG
GATATGAAGC CAGGCGCTCG ACTCCTGACC TACGCCGAGT TATCGGATCG CCTTATCCCT
TATGTGAAAG AACGAGGCTT CACCCACATC GAATTGATGC CGATCACCGA GCATCCCTTT
GATGGATCTT GGGGCTACCA AGTAACCGGG TGGTATGCCC CCACCAGCCG TTACGGCACC
CCTGACGAAT TCCGTGCCTT TGTCGATCGC TGTCACGCTG AAGGAATCGG CGTGATCATC
GATTGGGTCC CTGGACACTT CCCCAAAGAT GCCCATGGAT TGGCCTTCTT TGATGGAACC
CATCTCTATG AGCATGGTGA TCCACGCATC GGTGAACACA AAGAGTGGGG AACACTGATT
TTCAACTACA GCCGAAATGA AGTTCGCAAC TTTCTTGTTG CCAACCTCGT TTTTTGGTTT
GAACAGTTTC ACATCGATGG AATTCGAGTC GATGCTGTTG CCTCCATGCT TTACCGGGAT
TATTTGAGGC CCGATGGGGA ATGGCTACCA AATGAAAATG GTGGTCGCGA AAATACTGAG
GCTGTTCGTT TCCTCCAACA AGCCAATCAT GTGCTGTTCC AGCACTACCC AGGTGCCCTT
TCGATTGCAG AAGAATCGAC CACCTGGCCG ATGGTGACCC AACCCACTGA CATGGGCGGA
CTTGGATTCA ACCTCAAATG GAACATGGGT TGGATGCACG ACATGCTCGA CTATTTCGAG
CTGGACCCTT GGTTCCGTCA GTTCCACCAA AACAACATCA CCTTCTCTAT TTGGTACACC
TATACGGAGA ACTTCATGTT GGCCCTGAGT CACGATGAAG TTGTCCATGG GAAGAGTCAT
CTTCTTCACA AGATGCCCGG TGATGATTGG CAGAAGTACG CCAACACAAG GGCTCTTTTG
GCCTACATGT GGACACATCC AGGCAAGAAA ACCATCTTCA TGGGGATGGA ATTTGGCCAA
AGGGCTGAAT GGAATGTTTG GGGAGATCTC GAATGGGATC TGCTCAATTA CGAGCCGCAC
AAGGGAATTC AACGCCTGGT TGATGATCTG AATGTGCTGT ACAAGGCCCA ACCAGCCCTA
TGGCGCGATG ATTTTGATCA GTTTGGTTTC CAGTGGATTG ATTGCAACGA CAATCGCCAC
TCCGTTATCA GCTTCATGAG ACGCGATAGC GCCAGTGGAA CCTGGCTTGT TGTGGTGGCC
AACTTCACAC CACAGAGCCA TGCCAACTAC CGCGTCGGCG TTCCGCTTGA GGGCTTCTAC
GAAGAGATCT TCAATACCGA TGCTGCCAAA TACGGCGGCA GCAACCTCGG GAACATGGGT
GGCAAGCCCA CAGACGCTTG CGGCATTCAC GGCTATGAGC ACTCCTTGGA TCTCTGCCTG
CCACCACTGA GCTTGGTGGT GTTTCAGCAC GATCCAAAGC GCACGCTGAT CGAATCCTCC
GCGCCATCCG ACTAA
|
|---|
| Protein sequence | MGGAAVLDWM VQDGVRLENC RHDHPLAVLG PQPDDQGWTV RVWMPEAQKV TLLLGSQEIV
TSTPNHPWIF EASTPSDPGS NYKLRVERGG ITTEQHDPWA FRHEWMGEMD RHLFAEGNHH
HIWQRMGAHL TQIDGISGVM FCLWAPNALT ASVLGDLNSW DGRHHPMQKR LGGIWELFVP
GLDAGTLYKY EIRSQEGHCY QKADPYGFQH EVRPDNSSVV ARLEGYSWSD SSWMQDRDSR
NALDQPISVY EMHIGSWIHA SADEPWIQPD GQPRAPVPAA DMKPGARLLT YAELSDRLIP
YVKERGFTHI ELMPITEHPF DGSWGYQVTG WYAPTSRYGT PDEFRAFVDR CHAEGIGVII
DWVPGHFPKD AHGLAFFDGT HLYEHGDPRI GEHKEWGTLI FNYSRNEVRN FLVANLVFWF
EQFHIDGIRV DAVASMLYRD YLRPDGEWLP NENGGRENTE AVRFLQQANH VLFQHYPGAL
SIAEESTTWP MVTQPTDMGG LGFNLKWNMG WMHDMLDYFE LDPWFRQFHQ NNITFSIWYT
YTENFMLALS HDEVVHGKSH LLHKMPGDDW QKYANTRALL AYMWTHPGKK TIFMGMEFGQ
RAEWNVWGDL EWDLLNYEPH KGIQRLVDDL NVLYKAQPAL WRDDFDQFGF QWIDCNDNRH
SVISFMRRDS ASGTWLVVVA NFTPQSHANY RVGVPLEGFY EEIFNTDAAK YGGSNLGNMG
GKPTDACGIH GYEHSLDLCL PPLSLVVFQH DPKRTLIESS APSD
|
|---|
| |