Gene Syncc9902_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0861 
Symbol 
ID3741963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp861551 
End bp863065 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content56% 
IMG OID637771035 
Producthypothetical protein 
Protein accessionYP_376871 
Protein GI78184436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00177004 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATT CTTTTTTCGA CCAAAGCCTG GATGCCGTGT CGATCCGACG CAGGATTCAT 
GAAGTTGTGG CCGGAAAAGT TGGCTTCTAC AGCGTCGGGC TTTATCCCGC ATCACTGGCC
TACAACTGCG CGATGCAGAA CGAGGCAGGA CGGTTGTTGC TTGCCCCTCG ACTTGGTCGT
GAGCTGCTTG GAGCCTTCCC GGCGGAATCC ATCAAAAACA TGGATCCCGG GCACGTGGAA
ACCGTGCTCG ATATGGGAAC CCACCGCACG GGCACTGAGC GAACTCCCAA CACCCTTGAA
GACCTAATTC GACGCTGTGA GCTCGTGGTG CTCAGCGCCA ACAGCAATCA CATTGAAGAG
GATTTGCTGG AAGCCACGCG CCTGCGAGAA GAGCTGGGAC GTGATCAAGT GGTTTTGGCT
TGTCTAGCCG GTTCCTTTAA CCACGATCCA ATCAGTAACA GCGCCTATGT GCTCTGCGAA
AAGGAGCCCA ACTTGGCCTT TTTCTCAGGG TTTCATCGCC ATGGGGCCCT TCGCAATCCT
TTTGATAGTT TCACCGCCAA TTTCTGCCAT CCCAACGCCC TTACGGCAAT GCTGGGAGCG
CAATTACTCG ATCAACTTTC CCCCAACATT CAAGTAGCAG CTGGAGTTCA TAACGTTGAA
GGGCAATACA TCAAAGCGGC CAAAAACATG GCCTCCGTGT TTGCTGGTTT TGGGTACACC
TTTCACCAAG ACAACCCTGG GGTGCTGCCC ACGTTGCTGA CACTGCTTCT TGATCAGTGC
ATGGACCAGG CCGCCACGGT GTCGATGGCG CGTCCAGACC GCCAGAAGCT TTATCACCGG
CAACCGATTC CCCTCACAGA GCTGGGGTAT GCGGTGCCCA GAATTGAGGC AACGCTTGTT
CGAGACGGGG ATTTCGAAAA GGTGCGCGAC CACACGTTCA GCCAGCTCAC CGCCATGGTG
GCGGATGTCC GCGGCAGCAT GATGTTGCCG GTTTCTGGCA GTCCTACGCG GAATTTCCAA
GCCGGCCAGG TGCTCGCGAT GCGCATGCAG GAACAAGGTC GTTGCCCGCA TTCCATGGAG
GAACTCGAAG AGTGGTGTGA AGCAGCCGGG ATGCGAAAAG GGGGGCTGGA AGGGCTGAAA
TCGTTGCGCT ACTGGCCACA AATTGCCCGC AAATATGCAA TCCCAGTGCA TGACGCCTCC
ATGGTGAATT TGTTGTACAT GGCGATCTAT GGACGCCCTG GTGTGAAGGA AACCGCCTAT
CAAGTGATGA CGGAAAGTCG GGAACTATCC AGCTACTGCC AGGAATCGGT ACGACCTAGC
CATAGCCGTC GCTATGGCGA GGCCCTGCAA AACCTTGAAA TTCCAGAGGC CCTCGACCTC
CTGGTGAATG CTGTGATCGC CGATAACGCG CGGCAGGCCA TGCGCGGCGA AGTAACCCTG
GATGAAGCCA ATGAAGCAGG TGTAGCCGCC CACCTACAGC TCATGGACTT GATTGAATCG
CAAATGGACA CTTGA
 
Protein sequence
MRNSFFDQSL DAVSIRRRIH EVVAGKVGFY SVGLYPASLA YNCAMQNEAG RLLLAPRLGR 
ELLGAFPAES IKNMDPGHVE TVLDMGTHRT GTERTPNTLE DLIRRCELVV LSANSNHIEE
DLLEATRLRE ELGRDQVVLA CLAGSFNHDP ISNSAYVLCE KEPNLAFFSG FHRHGALRNP
FDSFTANFCH PNALTAMLGA QLLDQLSPNI QVAAGVHNVE GQYIKAAKNM ASVFAGFGYT
FHQDNPGVLP TLLTLLLDQC MDQAATVSMA RPDRQKLYHR QPIPLTELGY AVPRIEATLV
RDGDFEKVRD HTFSQLTAMV ADVRGSMMLP VSGSPTRNFQ AGQVLAMRMQ EQGRCPHSME
ELEEWCEAAG MRKGGLEGLK SLRYWPQIAR KYAIPVHDAS MVNLLYMAIY GRPGVKETAY
QVMTESRELS SYCQESVRPS HSRRYGEALQ NLEIPEALDL LVNAVIADNA RQAMRGEVTL
DEANEAGVAA HLQLMDLIES QMDT