| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0668 |
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| Symbol | |
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| ID | 3743624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 679897 |
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| End bp | 681009 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637770840 |
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| Product | photosystem II reaction centre protein PsbD/D2 |
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| Protein accession | YP_376680 |
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| Protein GI | 78184245 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B))
[TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.704102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAGGT CGCTGGCGTA TCCAACAGCC TGCGGTTTTC CGCACCCGTT CACCCTCATG
ACGATCGCTG TAGGACGCGC GCCTCAGCGG GGATGGTTTG ACGTCCTCGA TGACTGGCTC
AAGCGCGACC GCTTCGTATT CATCGGCTGG TCTGGCCTAC TTCTGCTCCC GACGGCCTAC
ATGGCTATCG GTGGCTGGCT GACCGGCACC ACATTTGTCA CCTCCTGGTA CACCCACGGC
ATCGCGTCGT CGTACCTCGA AGGTTGCAAC TTCCTCACCG CTGCTGTTTC GACCCCCGCT
GACGCGATGG GTCACAGCTT GCTGCTGCTC TGGGGCCCAG AAGCCCAGGG CGATTTTGTC
CGCTGGTGTC AACTCGGCGG CCTCTGGGCT TTTGTTGCCC TGCACGGTGC TTTCGCACTG
ATCGGCTTCA TGCTGCGTCA GTTCGAAATT GCTCGTCTCG TCGGCATTCG TCCCTACAAC
GCCATTGCCT TCTCCGGCCC GATTGCGGTG TTCGTCAGTG TTTTCCTGAT GTACCCCCTC
GGCCAGAGCA GCTGGTTCTT CGCGCCATCC TTCGGTGTGG CAGCGATCTT CCGCTTCCTC
CTCTTCTTGC AGGGCTTCCA CAACTGGACG CTGAACCCCT TCCACATGAT GGGAGTGGCC
GGCATCTTGG GCGGCGCTCT GTTGTGTGCC ATTCACGGTG CAACCGTGGA AAACACACTG
TTCGAGGATG GTGAGCAAGC GAACACCTTT AAGGCGTTCG AACCCACCCA GGAAGAAGAG
ACCTATTCCA TGGTCACCGC CAACCGCTTC TGGAGCCAAA TCTTCGGAAT TGCGTTCTCC
AACAAGCGCT GGCTGCACTT CTTCATGCTG TTCGTGCCAG TGATGGGCCT CTGGACTAGC
TCCATCGGCA TCATCGGTCT GGCCCTCAAC CTGCGCGCCT ATGACTTCGT GTCACAGGAA
ATCCGCGCTG CTGAGGACCC CGAATTTGAG ACCTTCTACA CCAAGAACAT TCTTCTGAAT
GAAGGTCTGC GTGCCTGGAT GGCACCGGCT GACCAGCCGC ATGAAAACTT CGTCTTCCCT
GAAGAGGTTC TGCCCCGTGG AAACGCCCTT TAA
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| Protein sequence | MLRSLAYPTA CGFPHPFTLM TIAVGRAPQR GWFDVLDDWL KRDRFVFIGW SGLLLLPTAY
MAIGGWLTGT TFVTSWYTHG IASSYLEGCN FLTAAVSTPA DAMGHSLLLL WGPEAQGDFV
RWCQLGGLWA FVALHGAFAL IGFMLRQFEI ARLVGIRPYN AIAFSGPIAV FVSVFLMYPL
GQSSWFFAPS FGVAAIFRFL LFLQGFHNWT LNPFHMMGVA GILGGALLCA IHGATVENTL
FEDGEQANTF KAFEPTQEEE TYSMVTANRF WSQIFGIAFS NKRWLHFFML FVPVMGLWTS
SIGIIGLALN LRAYDFVSQE IRAAEDPEFE TFYTKNILLN EGLRAWMAPA DQPHENFVFP
EEVLPRGNAL
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