Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0642 |
Symbol | |
ID | 3743464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 655426 |
End bp | 656496 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637770814 |
Product | dihydrouridine synthase TIM-barrel protein nifR3 |
Protein accession | YP_376654 |
Protein GI | 78184219 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATG AAACTGAGCG GAGTGGTCTT GATCATCCCC AACCTTTGAA CCAAAGCCTG CAAACACCCA TTCATCTTCC GGGCAATGGC ACCTGCCGTC AGCTTCATTC GCGGGTCCTG CAATCGCCTT TAGCGGGCGT AACCGACAAG ATTTTTCGTG GGTTAGTGCG GCGATGGTCT CGGGATTCCT TGCTGTTCAC AGAAATGGTG AACGCCACAA GCCTGGAGCT CGGCCACGGT TACGGAAAAA TGGACGACCT CAAGGCCGAG GAAGGCCCCA TCGCGGTTCA ACTCTTCGAT CACCGCCCTC ACGCGATGGC CCACGCAGCA CGCCGTGCCG AACAGGCTGG GGCCTTTCTT ATCGATATCA ACATGGGATG TCCAGTCCGA AAAATCGCGA AGAAAGGCGG AGGTTCAGGA CTCATCCGTG ACCCGAATCT CGCCACTCAG ATTTTGGAGG CGGTCGTTGA CGCTGTATCG ATTCCGGTCA CCGTAAAAAC GCGCCTCGGT TGGTGTGGGA GCAGTTCGGA CCCGATCACT TGGTGCCGAC AACTTCAAAA TGCTGGCGCC CAAATGTTGA CCTTGCATGG ACGAACCCGG GAACAGGGTT TCAAAGGCCA AGCGAATTGG AATGCGATCG CGGAAGTCAA GCAAGCCTTA ACGATTCCCG TGATTGCCAA TGGAGATATC AACAGCCCCA CCGATGCACT TCGGTGTTTA GAGATCACAG GAGCCGATGG CGTGATGGTG GGTCGCGGAA CCATGGGGTC ACCCTGGCTG GTGGGACAAA TTGAAGCCGC ATTCATGAAT CGACCGATTC CTGCAACACC AGACAGTGGT GCCAGACTTC ACTTAGCCAA AGAACAGTTG CACGATTTGG TGTCATCCAG AGGATCCCAC GGCCTCCTCA TTGCACGAAA ACATATGAGC TGGACATGCA CTGGGTTCCC AGGAGCACCA CAACTCCGCC ATTCCTTAAT GCGCGCAACA ACACCAGACG ATGCCTACCA ATTAATCGAT AACGCCATCA ACTCCTTACG CACAGTCGGG ATCGCACAAG AAGCAAAATA A
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Protein sequence | MADETERSGL DHPQPLNQSL QTPIHLPGNG TCRQLHSRVL QSPLAGVTDK IFRGLVRRWS RDSLLFTEMV NATSLELGHG YGKMDDLKAE EGPIAVQLFD HRPHAMAHAA RRAEQAGAFL IDINMGCPVR KIAKKGGGSG LIRDPNLATQ ILEAVVDAVS IPVTVKTRLG WCGSSSDPIT WCRQLQNAGA QMLTLHGRTR EQGFKGQANW NAIAEVKQAL TIPVIANGDI NSPTDALRCL EITGADGVMV GRGTMGSPWL VGQIEAAFMN RPIPATPDSG ARLHLAKEQL HDLVSSRGSH GLLIARKHMS WTCTGFPGAP QLRHSLMRAT TPDDAYQLID NAINSLRTVG IAQEAK
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