Gene Syncc9902_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0559 
Symbol 
ID3742886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp566460 
End bp567098 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content56% 
IMG OID637770730 
Productmethionine sulfoxide reductase A 
Protein accessionYP_376571 
Protein GI78184136 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGAG TGATCGGCGT ACTGCTCAGT GCCCTATTGG TGCTTGGAGG GTCGCAGTCC 
GTTGCGGCGG CTGAACAAAC GGCGGTTTTT GCTGGGGGAT GTTTCTGGTG TTTAGAACAC
GATTTGGAAC ACCTGCCTGG GGTGATTGAT GCGATCAGTG GCTATAGCGG CGGGCATGTG
GATCAGCCCA CCTACCGCCA GGTGAGCGGA GAAGATACAG GCCATCAGGA GGCGGTACAA
GTGCGCTTCG ATCCAGCTCT GATCTCCTAC AGCACGTTGT TGCGCAGCTA CTGGCGCAAC
GTGGATCCCT TTGACGGTGG TGGTCAGTTT TGTGATCGCG GCGACTCCTA CCGACCCGTG
ATTTTCACGG CTGATGCCGT CCAAGCCAAA GCTGCAGAAA TGAGTGCGGC GGCGGCGGCT
CAAGATCTAG GCCGACCGCG ATCCGCCATC AAAGTAGAAC TTCGTGGTTC TGCACCGTTC
TGGCCCGCAG AGCAATATCA CCAAAATTAT GCCGAGCTCA ACGACCTGAA GTATTCGTTT
TATCGGTTTA GTTGTGGCCG TGATCGCCGC CTCGATGCGG TGTGGGGCGC TCAAGCCAGA
ACTGATCAAA GTTGGCAAAA AGCTACCGAA TTAGAATAA
 
Protein sequence
MARVIGVLLS ALLVLGGSQS VAAAEQTAVF AGGCFWCLEH DLEHLPGVID AISGYSGGHV 
DQPTYRQVSG EDTGHQEAVQ VRFDPALISY STLLRSYWRN VDPFDGGGQF CDRGDSYRPV
IFTADAVQAK AAEMSAAAAA QDLGRPRSAI KVELRGSAPF WPAEQYHQNY AELNDLKYSF
YRFSCGRDRR LDAVWGAQAR TDQSWQKATE LE