Gene Syncc9902_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0417 
Symbol 
ID3742401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp431763 
End bp432260 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID637770589 
Producthypothetical protein 
Protein accessionYP_376431 
Protein GI78183996 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTGG TGGGCTGTAG CGGCCGCGTG GACCGAGCCA GCGGTGGGTT ATTGGCCAAA 
AGCCAACAGG ATCCTGCTCT GAGTGGTAAC GGGCAATGGC TTGCCGTGAT CAGCGACCTG
CGGGGGCGCC AAACCGTTCA ATTGCGCAAT GTGAGCAATG GATCGATCCA GGCATTGCCT
CAACTCAAAC GTCATCAGCC CCATAGCTCA CCATCGCTGA GCTGGAATGG TCGATACCTG
GCCCTGATCA CCCAACAGGG ACGGCGGCGG ATGGCAGTCA TCGCTGACCG TCTCAACGGG
CGATTGCACC CCATTCAGCT CCCTGGCGGC CGGGATCCGA TCCAAGTCAG CCTGTCACCC
GATGCCCAAA CCATGGCTCT ACAGGTGACC GATCAAGGTC TTTGGCGCGT TGAGATTTTT
GACCTAAGCG ATGTGTTGGA AATCGACCGA CCAGCGGGAC AAGCCTTGAG CACTCCACCG
CTCTCGCCAA CACCATGA
 
Protein sequence
MGLVGCSGRV DRASGGLLAK SQQDPALSGN GQWLAVISDL RGRQTVQLRN VSNGSIQALP 
QLKRHQPHSS PSLSWNGRYL ALITQQGRRR MAVIADRLNG RLHPIQLPGG RDPIQVSLSP
DAQTMALQVT DQGLWRVEIF DLSDVLEIDR PAGQALSTPP LSPTP