Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0381 |
Symbol | |
ID | 3742817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 393876 |
End bp | 395681 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637770552 |
Product | DASS family sodium/sulfate transporter |
Protein accession | YP_376395 |
Protein GI | 78183960 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.223448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGAGT TGATCAGCGC GCTTCAGACA CCGCACGCTT TGATCACCTT GTCGGTCCTC GGACTCGCAG TGATTCTGTT CATCACTGGA GCTTTGGCTC CAGAGTTGAC CGGATTGCTA AGCCTGGGAC TGTTACTGGC CTGTGGGGTC CTCAGTCCCC AAGAAGCCCT TGCTGGATTT GGGAGTCCGG CCTTGATCAC GCTGCTCGGA CTCTTCCCCG TTTCAGCTGC ACTGTTCAAA AGTGGAGCCC TCGATCGATT GCGAGGCTTA ATTGCTTCAG AGCGAATCCG GTCCCCAAGG CGACTGATCG CGCTGATGGC CTTTGTGATT GCACCCGTTT CCGGGGTCGT CCCCAATACA CCCGTGGTGG CGTCCTTGCT TCCGTTGGTT GAGAACTGGT GCCATCGCCA TGGGATTTCG CCATCAAGGG TGCTACTTCC CTTGTCGTTT TCCACGGTGC TAGGGGGAAC GCTCACGCTG TTGGGCAGCT CCGTGAACCT GCTGGTGAGC GACATCAGTC AGCAACTGGG CTACGGATCA TTCGAGTTGT TCACCTTCAC GCTGATCAGC CTGCCCATTT GGCTTGTTGG GGCGCTCTAT TTGGTTCTGG CGCCCCGTTC CCTACTCCCA GATCGCGGCA ATGATCTGGA TGATCTGAGC CCCCAACGGA GCGGGTACTG CACCGAGGTC ACCATCCCTG ACACCTCAGA ATTGGTCGGT CGATCACTCT TGAATAGTCG GCTCCAACGC CGGTTTGATG TCGATGTCCT TGAAATCCAA CGCGGAGGAG AACGCCTTCT TCCGCCTCTA GCCGATCGTC GCTTGGAAGC AGGCGATCAC CTCTTGCTGC GAGTCACCCG AGACGACCTA CTGCGACTCC AACAAGACCA CACCGTGCAG CTGACAACCC AAGGGCAAAA CGCTGGCTCC AGCCTGAATA CAAGCCAGGT CAGTGGCCAG AAAACCGTGG AGGTTTTGCT GCCAGCAGGA TCTACCCTCG CCGGAGCAAG CCTGCGAGAA CTACGGTTTA GGCAACGGCA CAACGCCACG GTTTTAGCGC TGCGCCGCGG CCAAGAAACC GTTCAAGAAC GGCTGGGTCA AGTGGTGCTC CGTGAAGGCG ACGTGTTGCT TCTTCAGGCA CCGTTCGATT CGATCCGCGG CCTGCAAGCA AGCAATGACC TACTAGTGCT CGACAGGCTG GAAGACGATC TCCCAACGGT GGGGCGCAAA CCCGTGGCCG TCAGTATCGC CATTGCCATG CTGCTGCTGC CCACGATCAC CCCCATCCCA CTGGTCGCAG CTGTTTTGCT AGCAATGGTG TCGGTGGTGG CGACGGGATG TCTGCGGCTT GGGGAACTCC AACGTTCGAT CCGCCTCGAT GTGATTTTGC TGCTCGGTTC CCTCACCAGT TTCAGTGTGG CGCTGCAAAC CACAGGTCTT GCCGATGCCC TAGCCGCTGG AGTCCAGCAG TGGCTCAACG GCTGGCCCAC GTACTACGCC CTCGTGGCGA TCTTCCTTGG CACCACCCTT CTAACCCAAG TCATGAGCAA TGCCGCTTCG GTGGCACTCT TAGCTCCAGT GGCTGTGCAA CTAGCTCCAG CCCTCGGACT CTCCCCTTTC GCCCTCTTGA TCACCGTGTT GTTTGGGGCA AGTCAATCGT TCCTCACCCC CGTGGGATAT CAAACCAACT TGATGGTGTT CGGCCCAGGC AGGTATCGAT TTCTCGATGT CACCCGCTAT GGCTTAGGAC TGACGCTGAT CATGACCGCA TTGATCCCTG CGCTGATCCT TTGGCATTAC GGCTGA
|
Protein sequence | MTELISALQT PHALITLSVL GLAVILFITG ALAPELTGLL SLGLLLACGV LSPQEALAGF GSPALITLLG LFPVSAALFK SGALDRLRGL IASERIRSPR RLIALMAFVI APVSGVVPNT PVVASLLPLV ENWCHRHGIS PSRVLLPLSF STVLGGTLTL LGSSVNLLVS DISQQLGYGS FELFTFTLIS LPIWLVGALY LVLAPRSLLP DRGNDLDDLS PQRSGYCTEV TIPDTSELVG RSLLNSRLQR RFDVDVLEIQ RGGERLLPPL ADRRLEAGDH LLLRVTRDDL LRLQQDHTVQ LTTQGQNAGS SLNTSQVSGQ KTVEVLLPAG STLAGASLRE LRFRQRHNAT VLALRRGQET VQERLGQVVL REGDVLLLQA PFDSIRGLQA SNDLLVLDRL EDDLPTVGRK PVAVSIAIAM LLLPTITPIP LVAAVLLAMV SVVATGCLRL GELQRSIRLD VILLLGSLTS FSVALQTTGL ADALAAGVQQ WLNGWPTYYA LVAIFLGTTL LTQVMSNAAS VALLAPVAVQ LAPALGLSPF ALLITVLFGA SQSFLTPVGY QTNLMVFGPG RYRFLDVTRY GLGLTLIMTA LIPALILWHY G
|
| |