Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0360 |
Symbol | |
ID | 3743655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 370186 |
End bp | 371910 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637770530 |
Product | RND family outer membrane efflux protein |
Protein accession | YP_376376 |
Protein GI | 78183941 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGGAC AGGCCAGCTC ATCAAAAGAC TCCACTTCTG CGTTAACTGA TCAATCCACG TTGCCGACAG CACCTCAGCT GAAGGGTGGG CGACCCAGGC TCAACGATGA CGCTGTAGCT CCTGCGGCTA CTGAATTAAC ACCGTCTCTT CAGCCGTTGA AGGCCCCCCC AAGCCTGGCG CTGCCGAATC AAAAACAGCA AGTCAGCATT CATGAACTTC GCCCTCTCAC CCTTGAGGAT GCGTTGCTTC TGGCAGAGGT AAATAGTCCG GTCTTGAAAG CTGCGGCGAG TCAGGTCGAA CAAGCCAAAT CGTCTTTGCG TGCAGCAATT TCATCCTGGT ATCCCACGGT TGACCTTTCA GCGAGCGGTC TACCTGAATA TTTCAAGTCT TACTCCTTCC AAAACCCTGA TTTCGTTCCG GATCGGCTGG TGCAGAAGAA CACCGGTGAA ATCAATCCCT TAACCGGTGC ACCCCTCACT CGTAACGAGA CGCGCGATGG ATACAACGAA CGGTATGGCC GGGAATGGCG TGTCAACGCC AGTCTCCAGG TGAGTTGGGA CATTATTAAT CCAAGGCGTG TTCCGCAGAT CGCTGCTGCC CGAGATCAGT ACGAGCAGGC TCGTGATTCG TATGCGATTG CTCTGCGCGA TCTACGGCTG AATACGTCCA CTGATTACTT CAATCTTCAA GAAGCAGACG AGGGCGTTCG GATTGGCCAA GCATCGGTTC GTGCTTCGTT GGTGAGCTTG AGAGATGCCC GTGCTCGTTT TAATGCCGGT GTGAATACCA AGCTTGAAGT TCTTGAAGCC GAAACTCAGT TAGCGAGAGA CCGCAACATC CTCACTTCAA AATTGGGAGA TCAGGACACG TCGCGTCGTC TTCTGGCGTC GAAGTTGGAT TTACCCCAAG ACGTCACTCC CACTGCAGCA ACACCCGCCA GACCACTTGG TAGCTGGCAA CCCTCGTTGC AAGAAAGCAT TGTTGCCGCC TTCAACTTCA GAGAAGAGCT CGACAGTTTG TTATTGAGCA TTTCGATCAA TAACAGTGAA GCCAATGCAT CTCTTGCAGC TGTTCAGCCG GTTCTCAGCT TCGTCAACAC CAGTAGTACC AGCCGACGTG AGGGACAGAG TGGGAAGACC TCGCTGGGGG ATATCGACAT GGATGACTAC GTATGGAGTG TTCAGAATTC CACCTCTTTA AGGGCAACCT GGCGGTTGTT TGATGGAGGG AGGGCTCGCG CTGAGTATCG CCGCTCCAAG CAAGCTGCTG AGGAGAGTTC TTATCGCTTT GCCCGAGCGC GTGATTCCAT CCGCCTTGAG GTGGAGCAAA GCTTCTTTGG GCTTCGAACA GCTGTCCAAA ACATTCAAAC CACTGGGAGC GAAGTTCTCT CGGCTCGAGA ATCTCTTCGT TTGTCCCAGC TTCGTGTTCA AGCCGGTGTG AGTACCCAAA GGGAAGTGGT GAACAACCAG AGGGATCTCA CTAATGCTGA GTTGCGTTAC GCCGGTGCGA TTCGCGACTA CAACACCAGC CTTGCTCAAT TGCGTCGTCG TACCGGCTTA GATGCATTGG TGTCCTGCAG CAATCCTGTG TTGCCATCCT CCAAAACTGT CGAAACGCAA ACGTCGATTC CGATTGAGCC CACTCCGTTG AAGTCGGTTT GTCCGGCGAT GGCCATCTCC ACCGCATCCA CCGATCGCGC TGAATCAGTT CGGTCGTTGT GGTGA
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Protein sequence | MLGQASSSKD STSALTDQST LPTAPQLKGG RPRLNDDAVA PAATELTPSL QPLKAPPSLA LPNQKQQVSI HELRPLTLED ALLLAEVNSP VLKAAASQVE QAKSSLRAAI SSWYPTVDLS ASGLPEYFKS YSFQNPDFVP DRLVQKNTGE INPLTGAPLT RNETRDGYNE RYGREWRVNA SLQVSWDIIN PRRVPQIAAA RDQYEQARDS YAIALRDLRL NTSTDYFNLQ EADEGVRIGQ ASVRASLVSL RDARARFNAG VNTKLEVLEA ETQLARDRNI LTSKLGDQDT SRRLLASKLD LPQDVTPTAA TPARPLGSWQ PSLQESIVAA FNFREELDSL LLSISINNSE ANASLAAVQP VLSFVNTSST SRREGQSGKT SLGDIDMDDY VWSVQNSTSL RATWRLFDGG RARAEYRRSK QAAEESSYRF ARARDSIRLE VEQSFFGLRT AVQNIQTTGS EVLSARESLR LSQLRVQAGV STQREVVNNQ RDLTNAELRY AGAIRDYNTS LAQLRRRTGL DALVSCSNPV LPSSKTVETQ TSIPIEPTPL KSVCPAMAIS TASTDRAESV RSLW
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