Gene Syncc9902_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0346 
SymbolaroK 
ID3743560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp356452 
End bp357027 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content56% 
IMG OID637770515 
Productshikimate kinase 
Protein accessionYP_376362 
Protein GI78183927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATC CCATTCTTTC CCTCAAAGAG CGCTTAAGCG GACGCAGCAT CTACCTCATC 
GGAATGATGG GGAGTGGAAA AACGAGTACT GGACGCCCCC TTGCGAAACG ACTGGGGTAT
GGCTTTGTCG ATGCCGATGC TGTGATCGAA CAGGTGGCCG GCTGCACGAT TCCAGAAATT
TTTGAACGGG ATGGGGAAGC AGGCTTCCGC TCCATCGAAA GCCAAGTGCT TAATGCGATC
AGTCAGCGCC ATTCCCTGGT GGTGGCCACA GGCGGTGGAG TGGTAACCAA ACCAGAAAAC
TGGGGACAAC TGCACAGCGG CATCGTGGTT TGGCTTGATG TGAATCGGGC CCAGCTCATC
GAACGCCTGC GGGACGACTC AACCCAAAGA CCGCTGCTGC AACAACCAAA CCCCGAAGCA
GCCTTAGACA CCCTCCTCCA GGAAAGACGG CCTCTTTACG GCGAAGCGGA TCTCACGGTG
GTGATCAAGG ACGAATCACC GGATGCCGTC GCGGATGGCA TCCTGCAACT CCTTCCGACG
CTCATCAAAG ATCCAACCGA ACAACGCGAG CGTTGA
 
Protein sequence
MTDPILSLKE RLSGRSIYLI GMMGSGKTST GRPLAKRLGY GFVDADAVIE QVAGCTIPEI 
FERDGEAGFR SIESQVLNAI SQRHSLVVAT GGGVVTKPEN WGQLHSGIVV WLDVNRAQLI
ERLRDDSTQR PLLQQPNPEA ALDTLLQERR PLYGEADLTV VIKDESPDAV ADGILQLLPT
LIKDPTEQRE R