Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0275 |
Symbol | |
ID | 3742320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 287734 |
End bp | 288933 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637770442 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_376291 |
Protein GI | 78183857 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCC ACGCCTTCAA GCGCTCCCTC CACCACTCAG AGCGATACAA CCGGCGCGGG TTCGGGCGAG CCGAAGAAGT GGCCGAAAAT CTTGAGCAGG CCTATCAAAG CGGGCTCATC GGCACGATTC GCGATAACGG CTACAAGCTC ACGCATGGAC GCCTCAATGT TCATCTAGCC GAAGCGTTTG GCTTCTGCTG GGGTGTCGAA CGTGCCGTCG CGATGGCCTA CGAGACGCGA CGTCATTACC CCAGCGAGCG GTTGTGGATC ACCAACGAAA TCATCCACAA CCCCTCCGTC AACGATCATC TGCGCGAGAT GGACGTTTTG TTTATTCCGG TTGAGGAGGG GGTGAAGGAT TTTTCAGGAG TCACATCCGG CGACGTTGTG ATTCTTCCCG CCTTCGGGGC CACCGTTCAG GAAATGCAAC TGCTCAATGA GAGGGGTTGC CACATCGTGG ACACCACTTG TCCATGGGTC TCCAAGGTAT GGAACACCGT GGAGAAACAC AAAAAGCACA CCTTCACTTC CGTGATCCAC GGCAAGGTGA AACACGAAGA AACCCTGGCG ACGAGCTCAT TTGCCGGAAC CTACCTTGTG GTTTTGGATC TCGAAGAAGC CCAGATCGTC GTTGATTACA TCCTTGGCAA AGGGGATCGA GAAGCATTCA TGCAGCGTTT CGCCAAAGCA TGTTCAGAAG GATTTGATCC AGACCGAGAC CTGGAGCGTC TCGGTGTCGC CAACCAGACC ACCATGTTGA AGAGTGAAAC CGAAGAAATC GGCCGAATGT TCGAGCGCAC CATGCTGAGC AAGTACGGCC CCGCTGATCT GAACGAGCAT TTCTTGGCGT ACAACACCAT TTGTGATGCC ACACAAGAAC GTCAAGACGC CATGTTCTCC CTCGTTGACG AGCCCTTAGA CCTGTTGGTG GTAATTGGGG GCTTCAATTC TTCCAACACC ACCCATCTGC AGGAAATAGC CGTCAGTCGC GGCATCCGAT CGTTCCACAT CGATACACCC GACAGGATCG ACGAAACGAC CAACTCAATT GAACACAAAC CTCTGTCCGA GGACTTGAAA CGCGATCAGG TCTTTCTGCC AGCTGGGCCT GTCACCGTAG GAATTACGTC TGGAGCATCC ACTCCAGATC GAGCCGTGGA AGCTGTGATC GAAAAGTTGA TGCGCCTCAG CGAAAACTGA
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Protein sequence | MDTHAFKRSL HHSERYNRRG FGRAEEVAEN LEQAYQSGLI GTIRDNGYKL THGRLNVHLA EAFGFCWGVE RAVAMAYETR RHYPSERLWI TNEIIHNPSV NDHLREMDVL FIPVEEGVKD FSGVTSGDVV ILPAFGATVQ EMQLLNERGC HIVDTTCPWV SKVWNTVEKH KKHTFTSVIH GKVKHEETLA TSSFAGTYLV VLDLEEAQIV VDYILGKGDR EAFMQRFAKA CSEGFDPDRD LERLGVANQT TMLKSETEEI GRMFERTMLS KYGPADLNEH FLAYNTICDA TQERQDAMFS LVDEPLDLLV VIGGFNSSNT THLQEIAVSR GIRSFHIDTP DRIDETTNSI EHKPLSEDLK RDQVFLPAGP VTVGITSGAS TPDRAVEAVI EKLMRLSEN
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