Gene Syncc9902_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0212 
Symbol 
ID3743022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp224402 
End bp225616 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content60% 
IMG OID637770381 
ProductpolyA polymerase 
Protein accessionYP_376230 
Protein GI78183796 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.809405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGA CCGGTGTGCC GTCCTCTTTG CTGGCTGAGT TGCGATCGGC GGCTGTGGGT 
GCAGGTGTGA AGCGGTTGGC GATTGTCGGT GGTGCTGTGC GGGATGGCCT GCTCCATGAG
CGCTATGGCC GGGTTTGGAC AGGTGTGCCT GATTTGGATT GGATTCTCGA AGGTGACGCC
ATGCGCCTTG CCGCTGAGCT AGTGAAACGG TGTGGAGAGC AACGGGTGAC CGAACTTCAG
AACTACGGGA GCTTTGGCAC GGTTGCCCTG CAGCTCGATG GCATTGCCTT GGATTTCGCG
ATGGCGCGCA AGGAGACCTA CCCCATGCCA GGTGAGAACC CCGTGGTTGA ACCAGGCTCG
TTGGACTCTG ATCTAGTGCG TCGCGATTTC ACGATCAACG CGATGGCTCA GGATCTGCTG
TCTGGACAGC TCATCGATCC GCACCGAGGT CAGCAGGATT TGGCCGAACG ACGTTTGGTG
TTTCTCCATG ATGAGAGCGT GTCGGATGAC CCCACCCGTG TGATCCGTGC CAGTCGTTAT
GCGGCTCGGT TGGGATTTGT TCTGTCGCCG GAGGCGCTGC AGCAAGTGAC TGCCACGGTG
CGGCGTTGGC CATGGTCTTG GCAATTGCAC GATGCACCGG ATCAGGCTCC ACCGGCATTG
GCGAATCGAC TGCGGATGGA GCTCGATCGT CTGTTTGCGG GTGAGCCTTG GGCTTTGGCA
CTCGATTGTT TAGAGGAGTG GCAGGCAATG GCGTTGTTGG ATCCGTCCTT GCAGCACGAT
CGGGGCCGAA ACCGTCGAAT TGCTTGGGCG CAACGGCTTG GACTTCCCTT GCTACCGGCC
TGGCTAGCGG GTGCACCGGA TCCCGAGGCG GTTGCCCGTC GCTTGGGTGT GCCTGGTCAA
CAGCAGCGGT GGCTCAAGCA GCTTCTGCAG CTTCAGGATT GGTTGGTGTC TACAGATGCA
CCTGACGTTC ATGCGGCCCC AGACGTCTGG ACTGCTGCTC TGGAGAACCA GGGCTGGATG
CCAGAAACAG TGGCCTTCAT GGTGTGCTCA CAACCCCCGC AATGGAAACC GTTGTTGCGC
TGGTGGGGGC GTTGGCGACA TCTGAAATCA CCCAGAAGCG CTCGGGATCT CATCGCCGAT
GGTTGGTCGT CTGGTCCCGC ATTAGGGAAT GAATTGCAGC GTCTACGCCT GGAGGCGCTG
AAGCGAAGCC GATGA
 
Protein sequence
MNLTGVPSSL LAELRSAAVG AGVKRLAIVG GAVRDGLLHE RYGRVWTGVP DLDWILEGDA 
MRLAAELVKR CGEQRVTELQ NYGSFGTVAL QLDGIALDFA MARKETYPMP GENPVVEPGS
LDSDLVRRDF TINAMAQDLL SGQLIDPHRG QQDLAERRLV FLHDESVSDD PTRVIRASRY
AARLGFVLSP EALQQVTATV RRWPWSWQLH DAPDQAPPAL ANRLRMELDR LFAGEPWALA
LDCLEEWQAM ALLDPSLQHD RGRNRRIAWA QRLGLPLLPA WLAGAPDPEA VARRLGVPGQ
QQRWLKQLLQ LQDWLVSTDA PDVHAAPDVW TAALENQGWM PETVAFMVCS QPPQWKPLLR
WWGRWRHLKS PRSARDLIAD GWSSGPALGN ELQRLRLEAL KRSR