| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0169 |
|---|
| Symbol | |
|---|
| ID | 3743682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 175715 |
|---|
| End bp | 176962 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637770337 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
|---|
| Protein accession | YP_376187 |
|---|
| Protein GI | 78183753 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAGG GTCTCCATCG CGTCGTCATC ACCGGTCTCG GCGCGGTTAC ACCGATCGGC
AACACGGTTC AGGACTACTG GAACGGGTTG ACCTCAGGAC GCAACGGCGT CGATGGGATC
ACCCTGTTCG ATGCCTCAAA CCACGCCTGT CGCTTTGCAG CAGAAGTGAA AGCATTTGAT
CCCGCTGGCT TGATCGAGCC CAAGGACGCC AAACGCTGGG ATCGCTTCTG CAAATTTGGA
GTGGTGGCCG CCAAGCAAGC CATCGCCCAC GCAGGTTTGG AGATCACGGA TGCCAACGCG
CACCGGATTG GCATGATCAT TGGCTCCGGC GTTGGCGGCT TGCTGACGAT GGAAACCCAG
GCCCACGTCT TGGAGGGCAA AGGACCGGGA CGGGTGAGTC CGTTCACGGT GCCGATGATG
ATTCCCAACA TGGCCTCAGG GCTTGCTGCG ATTGCGCTTG GCACCAAGGG GCCCAGCTCT
GCCGTGGCGA CGGCCTGTGC CGCCGGCTCG AATGCCATTG GCGACGCCTT CCGTTTGCTC
CAGCTCGGCA AAGCCGATGC GATGGTTTGC GGTGGCGCGG AATCGGCGAT TACCCCCCTT
GGGGTCGCTG GATTCGCAAG CGCCAAAGCC CTGTCGTTCC GCAACGACGA CCCCACCACC
GCGAGTCGCC CGTTCGACAA AGAGCGGGAT GGCTTTGTGA TTGGCGAAGG GGCCGGCATT
CTGGTGCTGG AAACCCTGGA GCACGCCCAA ACCCGTGGTG CCAATGTTCT TGGCGAAGTG
ATCGGCTACG GGATGACCTG CGATGCCCAC CACATCACCT CTCCAACCCC AGGCGGAGTC
GGTGGTGCTG AAGCCATGCG CTTGGCCATG GACGATGCCG GCATCACTGC AGACGCGGTG
GATTACGTGA ATGCCCACGG CACCAGCACC CCCGCCAACG ACAAAAACGA AACCTCGGCG
ATCAAAAGCG CCCTCGGATC GCGTGCCCTG CAAATTCCCG TGAGCTCGAC GAAATCGATG
ACTGGCCACC TTCTTGGTGG ATCCGGTGGT ATCGAAGCCG TCGCTTGCGT GCTAGCTCTG
CAGCACGGAA TCGTCCCACC GACGATCAAT CACAGAACTC CAGATCCCGA TTGTGATTTG
GATGTCGTGC CCAACACCGC CCGAGATCAG ACATTGGCAA CTGTGTTGTC CAACTCCTTC
GGGTTTGGCG GCCACAACGT CTGCCTTGCG TTCCGACGCT TCAGCTGA
|
|---|
| Protein sequence | MVEGLHRVVI TGLGAVTPIG NTVQDYWNGL TSGRNGVDGI TLFDASNHAC RFAAEVKAFD
PAGLIEPKDA KRWDRFCKFG VVAAKQAIAH AGLEITDANA HRIGMIIGSG VGGLLTMETQ
AHVLEGKGPG RVSPFTVPMM IPNMASGLAA IALGTKGPSS AVATACAAGS NAIGDAFRLL
QLGKADAMVC GGAESAITPL GVAGFASAKA LSFRNDDPTT ASRPFDKERD GFVIGEGAGI
LVLETLEHAQ TRGANVLGEV IGYGMTCDAH HITSPTPGGV GGAEAMRLAM DDAGITADAV
DYVNAHGTST PANDKNETSA IKSALGSRAL QIPVSSTKSM TGHLLGGSGG IEAVACVLAL
QHGIVPPTIN HRTPDPDCDL DVVPNTARDQ TLATVLSNSF GFGGHNVCLA FRRFS
|
|---|
| |