Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0163 |
Symbol | |
ID | 3743676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 169108 |
End bp | 169878 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770330 |
Product | TPR repeat-containing protein |
Protein accession | YP_376181 |
Protein GI | 78183747 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGGT GGTTGGTTGG CTTTCTGGCG GTGAGCTTGA TCTGGCCCTG GTCCGCCCTC GCATTGGATC TAAAGGGTCT TTATGAACAG GCTTTAAATG CGAGCCGATC GGGTGATTTT GTTCAAGCTC TACCGCTATG GGATCGGGTG TTGGAGCAGT CCCCTCAAGA TGCGGCGGCC TTGAGCAACC GTGGCAATGT GCGGCTGGCG CTTGGCGATC TTGACGGCGC GATTGAGGAT CAAACTCGAT CGATTGAGTT GGCCCCAGAT GAGGCCGATC CGCATCTGAA CCGCGGCACT GCGGAGGAAG CATTGCGAGA TTGGTCAGCT GCTGCTGCCG ACTATCTCTG GATCCTTGAA CGGCAGCCGG ACGATGCGTC CGCCCTGTAC AACCTCGGCA ATGTTCGTGG CTCCGAAGGG GATTGGGATG GAGCTCGCGA TTTGTATGGG CAGGCTTCCC TTGCTCGGCC GGGCTTTGCG ATGGCCCGTT CCAGTGAGGC CTTGGCTGCC TGGCAACAGG GTGATCTGGC CTGGGCGGAG CTGGAGTTGC GCAAGTTGAT CAGGCGTTAT CCCCTCTTTG CCGATGCCAG AGCTGCCTTA AGTGGTTTGC TGTGGCGTCA GGGTTCTGCC GGAGAAGCCG AAAGCAATTG GGCCGCGGCG GCGGGGCTGG ATCAGCGCTA TCGCCAGGCA GATTGGTTGG TGGATGTGCG TCGCTGGCCA CCCCAGCCCA CCCAAGACCT GATGGCTTTT TTGGCTTTGG AGAAGTCTTG A
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Protein sequence | MKRWLVGFLA VSLIWPWSAL ALDLKGLYEQ ALNASRSGDF VQALPLWDRV LEQSPQDAAA LSNRGNVRLA LGDLDGAIED QTRSIELAPD EADPHLNRGT AEEALRDWSA AAADYLWILE RQPDDASALY NLGNVRGSEG DWDGARDLYG QASLARPGFA MARSSEALAA WQQGDLAWAE LELRKLIRRY PLFADARAAL SGLLWRQGSA GEAESNWAAA AGLDQRYRQA DWLVDVRRWP PQPTQDLMAF LALEKS
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