Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0152 |
Symbol | |
ID | 3743988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 158562 |
End bp | 159872 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637770319 |
Product | putative sugar-binding protein |
Protein accession | YP_376170 |
Protein GI | 78183736 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTTC AGCTGACGCG TCGACGGTTG TTGTTGGCTG CCGTGGCGGC TGGCTTGGCG GCTTGTGGGC GACGAAGCCC TGGACCAGAA CTGAATTTGT GGACGTTGCA GCTTGCGCCC AAGTTCAACC GCTATTTCGC CGATTTGATA GCGGCTTGGA CAACGGTGCA TCCCGAGGAT TCGGTGCGCT GGACGGATCT GCCTTGGGGG TCGGTGGAAC GCAAATTGTT GGCTGCTGTC TATGCCCGCA CAGCTCCCGA TCTGGTGAAT TTGAACCCAC CTTTTGCGGC GAATTTGGCC AGTAAAGGGG GGCTCACGGA TCTCACGCCC CTACTGCCAT CGGATGCGGC TGAGCGCTAT TTGCCATCGG TGTGGCAGGC CTGTCGCGAC CCAGATGCCG GACAGATCGC TGTGCCTTGG TATCTCACCG TTCGGCTCAG TTTGGTGAAT CGAGAGCTGT TGGATCAGGC CGATATCGCG GCACCGCCGA CCCGATGGGA TGAGATTCCT GCCTTTGCCC GGCAGATTCG GAAGCGGACG GGGCGGTATG GCCTCTTCCT CACCACGGTG CCAGACGATT CTGCTGAGAT GTTGGAAACC CTCGTCCAGA TGGGGGTCTC GTTGTTGGAT TCGGAGCGAC GCGCCGCGTT CAATAGCCCA GCTGGCCGCA GGGCGTTCCA GTTTTGGACC GATTTATATC AAGAGGGATT GTTGCCGCGG GAAGTCGTCA GTCAGGGCCA ACGGCGGGCG ATTGAACTGT TCCAGAGCGG GGATTTGGCG ATGGCGGCCA CAGGGGCTGA GTTCTTGCGC AGCATCCAAA CGAATGCACC AGGGGTGGCC GCGGTGACGG AGTCACATCC GCCCGTAACG GGTGCTGATG GCATGGCGAA TGTCGCCTTG ATGACGTTGG CGGTGCCTCG GCAAAGCAGC AAGCAGGCCC TAGCCCTTGA GTTGGCTCTG TTCCTCACCG ATGCCACCAA CCAGGCGCGT TTTGCCACCG AAGCACGGGT TCTTCCCTCG TCTGTGGAGG CTTTGGCCAT GGTGAGGTCC CAACTGGAGC GAGAGAAAAC CCGCACGCCT CAGCAGGATC AGATTCGTCA AGCGCGGTTG CTGTCGGCGA TCACGTTGGA GCGGGCTCGT GTTTTGGTGC CGGCTTTGCC AGGAATTAAA CGATTGCAGA AAATCCTCTA CACCCAGTTG CAGCGAGCGA TGCTGGGCCA AGTGGACAGC GCTGAAGCAC TCGGGGCTGC GGCCATGGAG TGGGATCGAT ATGCCGCGTC GCGTTGGCCC CTGGATGGAA GTAATTCTTA A
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Protein sequence | MTFQLTRRRL LLAAVAAGLA ACGRRSPGPE LNLWTLQLAP KFNRYFADLI AAWTTVHPED SVRWTDLPWG SVERKLLAAV YARTAPDLVN LNPPFAANLA SKGGLTDLTP LLPSDAAERY LPSVWQACRD PDAGQIAVPW YLTVRLSLVN RELLDQADIA APPTRWDEIP AFARQIRKRT GRYGLFLTTV PDDSAEMLET LVQMGVSLLD SERRAAFNSP AGRRAFQFWT DLYQEGLLPR EVVSQGQRRA IELFQSGDLA MAATGAEFLR SIQTNAPGVA AVTESHPPVT GADGMANVAL MTLAVPRQSS KQALALELAL FLTDATNQAR FATEARVLPS SVEALAMVRS QLEREKTRTP QQDQIRQARL LSAITLERAR VLVPALPGIK RLQKILYTQL QRAMLGQVDS AEALGAAAME WDRYAASRWP LDGSNS
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