Gene Syncc9902_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0125 
Symbol 
ID3744000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp134912 
End bp135781 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID637770292 
Producthypothetical protein 
Protein accessionYP_376143 
Protein GI78183709 
COG category[S] Function unknown 
COG ID[COG3551] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.123999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTCA GAAGTTTCTT AAGAAGGTGC CTATCATCTT CACAACAACT TTGGACTTTT 
CCCCAAAAAG TCATGTTGCG ATTATGCCGG TTGGCTTCAA ATAGGGTTCT TAATGGTGGG
CCAGCCGTCT TCATTTCTGG TCCTATTCCT AAAGCTGATT GGAGGCGGAG TCAGGTTGTG
GTGATTTTGG GTATGCATCG CAGCGGTACA AGTTTATTGA CTGGAACACT TCAGGAAGCT
GGACTCGTGC TTGGTGATGT CGTGACCTCT GCTCCCCATA ACCGTAAAGG CAATCGAGAG
GCTCTTCCGA TTCGTGCTTT GCATGATGAT CTGTTGCATT CTTCTGGTGG TTCTTGGGAT
CATCCTCCGT CGCAAGTGAT CTGGAAGCCT AGTCATCGTG CTCTGAGGGA TGACATTGTT
GTCGGCTATC AACACGAATG TTTCTGGGGT TTCAAAGATC CGCGTAGTTT GTTTTGTTTG
GAGGGTTGGC TTGAGGTATT GCCGGAGCTT CAGCCAGTTG CTATCTTTCG GCATCCTGAA
GCCGTGGCTC GATCTCTTAG GGCGCGTGAG GGGATGGCCT TAGCTGATGG CCTTGTTCTT
TGGACGTTGT ACAACCAACA GCTGCTGTAC TGGATGGATC AATTGGATGT GCCCCTTTTG
CATTTCAGTT CAGATCTCAA CGCTTTTTGT ACTGATGCCG TTGCGTTGAT TGATCGATTG
AACTTGCCAC ATAGAATGAG TGCAAATTCG CTCCAGTTTC CCGATGCAAA ATTGCATCAT
CAGAGCTCAT CTAAGCTGCC TCTGCCTCGG GATGTTCAAG ATCTCTATGA TCAGCTTTTA
GATCGTAAAT TCTCTACTCT TTCTATATAA
 
Protein sequence
MLFRSFLRRC LSSSQQLWTF PQKVMLRLCR LASNRVLNGG PAVFISGPIP KADWRRSQVV 
VILGMHRSGT SLLTGTLQEA GLVLGDVVTS APHNRKGNRE ALPIRALHDD LLHSSGGSWD
HPPSQVIWKP SHRALRDDIV VGYQHECFWG FKDPRSLFCL EGWLEVLPEL QPVAIFRHPE
AVARSLRARE GMALADGLVL WTLYNQQLLY WMDQLDVPLL HFSSDLNAFC TDAVALIDRL
NLPHRMSANS LQFPDAKLHH QSSSKLPLPR DVQDLYDQLL DRKFSTLSI