| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0115 |
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| Symbol | |
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| ID | 3744029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 119210 |
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| End bp | 120949 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637770281 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_376133 |
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| Protein GI | 78183699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.165397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTT CTAATTTTCA AAATTCTAAG ACCAATGTGC GCCCTTTGAT CTTTGAAGCC
GAAAAAACTA CAGATCCTGA ACGTTTAGTT TCTTTGTTAT CTCAGGTCTC TCTTAAATCA
GAGCCAGTAT ACCGTTTTGT AGAAGCCCTT TTACTTTGGA AGCTGAATTA TCTTGACGAA
TTATGTAATC TTTTGTCAAC ACTCCCTACA TCCTTCCACT CAGATCCTCA GTACTGGATT
TTTCTTGGTA TGTACGAAAA TGCGCAATCT AAAGGTTCTT CTAGATCTCT CTTTGCATAT
CAGAAAGCAC TTTTACTTTC CCCTGGTAGA GCAGATATAC ATTTCAACTT AGCTAACTCA
TATTCGAGCT TTGAATCTTC TAAAGCACTT CATCACTATC TAGTTAGTTT GTCTATTGAT
TCACTTCAGA GCAATGTTTG GCATAATCTT GGTAATCTTC TTCGTGACGC TAAGTTCTTT
TCTTGTTCGC TTACAGCTTT CAAGAATGCT CACTTCCTTT CCCCCTATGA TGTAGATATT
CTTTGTAATT TTGCGCTTTC ACTTATTTTG AATGGTTCCT ATAAGTCTGC TGAACTCACG
TTAGTGCATT GCCTTACCCT TAATCCAAAT CACTTTCAAA GTCATTTAAA TCTTGGCTTT
TTGTTTATTA AGCTTCGTCG CATTAATGAA GCAATTATAA ATCTTCAAGA AGCTCTTCGC
TTAGAGGGTT GTTCTCTTTG TGCTGATTTA AAATTTAATT TATCGCTATG TCATCTTCTT
CTTTGTAATT ATGTTATCGG TTGGGATCTT TATGAGAATC GTTTATATAC CTCCATGGTG
CCTTTATCAT TACACCCAAG TCATGGACCG TTGATTGAAT CACTAGATCA ACTGTCAACT
AATTCTTCTC CACCACTTCT TATTTGGTCC GAACAAGGCC TCGGTGATTG TATCCAGTTT
TGTAGATACC TTTTGCTACT TGATGCGTTG TTTATTGATT ATGACTTCTT GTGCCCACTT
CCTTTAATAG CACTTATCAA AAACTGGCTT AACCCCAAAG GTAATGTTCT TGAGTTGGAA
ACATTCATGT TTTCATCTGA TCGTTTACAT TGCCCTCTTC TTTCTCTGCC TAGTCTCTTT
TCTACAACAC TTGATTCTAT ACCTTCCACA TTGCCTTATT TCAGTACGCC TAAGAACATC
CCTGGCCATT TAATTGCAGG AGATTCATTA GGGGGCTTGT CTGTTGGTAT CGTCTGGTCA
ACAAGTCCTT CGAATCCAAT TATGTATAAG AATAAAAGCA TTCCGCTTAA ACTTCTTATG
CCACATTTAG TTAAGTTGAT GGATCTTGAT CTTGTTAATT TGCATACTCT TCAGGTTGGT
CCCGATGCGT CACAGGTTAA TCCATGGCTT CATCACCCCC GTCTGATAGA TTGGTCCTCT
AAACTTTCAA ATTTCTCTGA CACAGCGTTT GTGATTAGTC AATTCGATCT CGTCATATCA
GTTGATACAG CTGTTGCTCA CCTTTCAGCT GCTCTTAATA TACCTACTTG GTGTTTGCTT
TCTCATGACG CTGATTTTCG TTGGCTTATC GATCGATCTG ATTCTCCTTG GTATCCAGGT
GTTATGAGAT TATTTCGTCA AGACACCCTT GATGATTGGT CTAGTGTTGT TAAATCTGTT
AATACTGTTT TTGATGATTT ATTCTTGCTT GATATTAGTT CTGTTTCCTC ATCTATTTGA
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| Protein sequence | MTFSNFQNSK TNVRPLIFEA EKTTDPERLV SLLSQVSLKS EPVYRFVEAL LLWKLNYLDE
LCNLLSTLPT SFHSDPQYWI FLGMYENAQS KGSSRSLFAY QKALLLSPGR ADIHFNLANS
YSSFESSKAL HHYLVSLSID SLQSNVWHNL GNLLRDAKFF SCSLTAFKNA HFLSPYDVDI
LCNFALSLIL NGSYKSAELT LVHCLTLNPN HFQSHLNLGF LFIKLRRINE AIINLQEALR
LEGCSLCADL KFNLSLCHLL LCNYVIGWDL YENRLYTSMV PLSLHPSHGP LIESLDQLST
NSSPPLLIWS EQGLGDCIQF CRYLLLLDAL FIDYDFLCPL PLIALIKNWL NPKGNVLELE
TFMFSSDRLH CPLLSLPSLF STTLDSIPST LPYFSTPKNI PGHLIAGDSL GGLSVGIVWS
TSPSNPIMYK NKSIPLKLLM PHLVKLMDLD LVNLHTLQVG PDASQVNPWL HHPRLIDWSS
KLSNFSDTAF VISQFDLVIS VDTAVAHLSA ALNIPTWCLL SHDADFRWLI DRSDSPWYPG
VMRLFRQDTL DDWSSVVKSV NTVFDDLFLL DISSVSSSI
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