Gene Syncc9902_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0106 
Symbol 
ID3744020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp106240 
End bp107097 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content39% 
IMG OID637770272 
Producthypothetical protein 
Protein accessionYP_376124 
Protein GI78183690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000918574 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCC TTATCGCTAT TGTTCATTAT TGGAATCCTG ATGGAGGCGG TAGGCATCAA 
TCTTTGCGTT CGGATCCTCA ACCTCGCATT GATGCACTTC AACATCAATT AATGAATATT
CTTCGAATTG GATCTAATCA GTCTGTTTTA CATCTAGCGG ACCGAGCAGT TTACCGTGCT
AATGATTCAT ACCGAAATAA CGTAGATATC AAAATTATTA CTGATGGTAC ACATCATGTG
CTGGATTATC TCGATCCTAG TTTTATGCAT GCTTTTGAGG AAATACCAAC TACACCATCT
AACCCAAAGT TTTTAGGATT TGAAGTTCAC AAAGTTCTTG CCGACCATCT TAACTCAAAT
TATGATTTAT ATTGTTATCT AGAGGATGAC TTATTGATTC ACGATCCAAC CTTTTTTTCT
AAGATTGCGT GGTTTAGTGG TTTCATGGGT TATCACTCCA TTCTTTTGCC TCAAAGATTT
GAATTCTCAC CGTTGCCCCA CGCTGTTGAT CGTTTTTATA TAGATGGTCC TTTGCCAGAA
GATGAACTTC GAAAACTAGT CTCCTCCTCT CCGGTTCGTC TTGTCCAGTC TCTAGGCTTT
AATATTCCCT TTGCTCCACC AGATAATCCT CATGCCGGAT GCTTTTTTCT TTCACACCAG
CAGTTGTCCT ATTGGGTATC TCAAGACTAT TGGTTAGATC ATGATGTCAG TTTTATATCG
CCCCTTGAAA GTGCTGCAAC ACTAGGCATA GCAAAGTGTT TTAGTATTTT TAAACCCTGT
TTTTCTCATG CCTCCTGGCT CGAAATTCAA CATCATGGAA CCGTTTTTCA TGAGTTAATC
GGTGATAGTT TTGCCTAA
 
Protein sequence
MNILIAIVHY WNPDGGGRHQ SLRSDPQPRI DALQHQLMNI LRIGSNQSVL HLADRAVYRA 
NDSYRNNVDI KIITDGTHHV LDYLDPSFMH AFEEIPTTPS NPKFLGFEVH KVLADHLNSN
YDLYCYLEDD LLIHDPTFFS KIAWFSGFMG YHSILLPQRF EFSPLPHAVD RFYIDGPLPE
DELRKLVSSS PVRLVQSLGF NIPFAPPDNP HAGCFFLSHQ QLSYWVSQDY WLDHDVSFIS
PLESAATLGI AKCFSIFKPC FSHASWLEIQ HHGTVFHELI GDSFA