Gene Syncc9902_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0085 
Symbol 
ID3744038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp84690 
End bp85556 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content33% 
IMG OID637770251 
ProductdTDP-4-dehydrorhamnose reductase-like 
Protein accessionYP_376103 
Protein GI78183669 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTTG TAATAGGATC TACGGGAATG CTAGGAAGTT CTTATGTTAG GCATCTCTCT 
TTAAATAATA TACCTTACCA TACAATATCT CGCAACATTG GATCGTCTTA CTGCATTGAC
TTGCTTCATA GTTTTGCTGA GATAGAGAAA CTTATAATAG ACAATAAATA TAGTGCTGTA
ATTAATTGTG CAGCAATCGT CTCTCTAGAT TATTGTGAAA GATTTCCATC TCTGGCTATG
CGAGTAAATT CAGATCTGGT GTTATGTTTG GCTTCTATAT GTGAAAAAGT AGGATCTATT
CTAATGCATA TTTCTACAGA TCATTTTTTT TCAGGTGACG GTAATTATCT TCATCCTGAA
GATCATCCAA TTGTAATTAA TAACAACTAC GCTTACTCAA AACACTTAGG TGAACTTAAT
GCTCTTAAAT TTCCTAACAC AATAGTATTA AGAACTAACG TAACAGGCTA TCGAAACGGT
TCATCATCAA CATTTATTGA ATGGTTGCTA TTTTCACTGA TGAATAATGA GCCAATTATA
CTGTTTGATG ATTTCTTTAC CTCCACCATT GATGCAGATT GCTTTGTACA TAACTCTCTT
CTTTTGTTAG AGTGTGAATT CAGAGGTTTA TTGAACTTAT CAAGCAATCA ATGTATTTCC
AAATACGAAT TTGGTCTTGA GCTTTCGAAT TTCCTAAATC TTGACTTCAC TAATGTCTCT
ATTGGATCAG TTGTAAAGCT ATTGCCACGA AGATCAAATA GTTTGGGCCT AGACTGTTCA
TTTATTGAAA GTATTCTCAA AAAGAATATG CCAGACACTA TCGATGTGTT AAAATCGCTT
ACCTTTTCAA ATATTTCTCC TGATTGA
 
Protein sequence
MILVIGSTGM LGSSYVRHLS LNNIPYHTIS RNIGSSYCID LLHSFAEIEK LIIDNKYSAV 
INCAAIVSLD YCERFPSLAM RVNSDLVLCL ASICEKVGSI LMHISTDHFF SGDGNYLHPE
DHPIVINNNY AYSKHLGELN ALKFPNTIVL RTNVTGYRNG SSSTFIEWLL FSLMNNEPII
LFDDFFTSTI DADCFVHNSL LLLECEFRGL LNLSSNQCIS KYEFGLELSN FLNLDFTNVS
IGSVVKLLPR RSNSLGLDCS FIESILKKNM PDTIDVLKSL TFSNISPD