| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0028 |
|---|
| Symbol | |
|---|
| ID | 3743169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 28601 |
|---|
| End bp | 29710 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637770194 |
|---|
| Product | putative cyclophilin-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_376046 |
|---|
| Protein GI | 78183612 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAAGT CGCATCAGCA CTGGGCTTCC CCCTTGACCC ATCAGCGTTT CAAGGCCGTT
CTGGTCGCCT TAATCAGCGT TGCGCTGTTC AACCTGGCAG CCCCTGCCTG GGCTGGGCTG
CCTCAGGGCA ATGCCGTCAA GGATCCAACG GCGATCCTTC GCGATGCGCT CCCCTTCGAG
CAAGACGACA TTCGTCAGCT GCAACATCGG CTGGAACTCA CGAGCGACGA CCTACGGGCA
AAACGTTGGA GTGCCCTGGG AAAGACGGTG TCGCGCAGTC AGGCCCTCCT CAAAACAAGA
CGCAACACGA TTCTTGATGC TGTTCCAGAG CCACTCCGTG ACCAAGCCAC AGCGCTGCTG
AGCGACGTGG ATACCGGCTT AGAGCAAATG GCCGCTCAGG TGAAAGCCGT CGACAAGCCA
GCCTTCATTG TCGACCGTCG CACCACGCTG ACTCGCATTG GTGACGTAGA GCGCTTGCTT
GTTGAGGACG GATTCGAACG AGCCATTCCC TCCGAATTCG ATGCATTGCC TCGTTTACAG
GGACGGGCCG TTGTCAACAT CAGCACCACC AAAGGGGACC TCACCACCGT TGTGGATGGT
TACAACGCAC CACTGACCTC CGGTGCGTTT GTCGACCTTG CTCTGAAGGG CTTCTATGAC
GGCTTGCCCT TCAACAGAGC CGAGGATTTT TACGTTCTGC AAACCGGCGA CCCCGAGGGT
CCAGAGATCG GATACATCGA TCCATCAACG AAGCAAGAAC GGCACGTTCC CCTCGAAATT
CGAATTCCTA GTGAAGCCGA CACGCTTTAC AACGAGACGT TTGAGGACGT GGGACTGTTT
AAAGCCACAC CAACCCTTCC CTTTGCCACC CTTGGCACCC TGGGCTGGGC CCACTCAGCC
AACGAACTCG ACGACGGCTC ATCCCAGTTC TTCATGTTTC TCTATGAGGC CGAGCTCACA
CCCGCCGGCC TCAACTTGGT GGATGGACGC AACACTGCCT TCGGCTACGT CGTTGATGGC
TTCGATGTGC TCGAAGAGCT TGGTGTCGAC GACGCAATCA AAACAGTGAC CGTCGTTGAT
GGAGCCAATC AACTCAAAGC CCACGCATGA
|
|---|
| Protein sequence | MPKSHQHWAS PLTHQRFKAV LVALISVALF NLAAPAWAGL PQGNAVKDPT AILRDALPFE
QDDIRQLQHR LELTSDDLRA KRWSALGKTV SRSQALLKTR RNTILDAVPE PLRDQATALL
SDVDTGLEQM AAQVKAVDKP AFIVDRRTTL TRIGDVERLL VEDGFERAIP SEFDALPRLQ
GRAVVNISTT KGDLTTVVDG YNAPLTSGAF VDLALKGFYD GLPFNRAEDF YVLQTGDPEG
PEIGYIDPST KQERHVPLEI RIPSEADTLY NETFEDVGLF KATPTLPFAT LGTLGWAHSA
NELDDGSSQF FMFLYEAELT PAGLNLVDGR NTAFGYVVDG FDVLEELGVD DAIKTVTVVD
GANQLKAHA
|
|---|
| |