| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0012 |
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| Symbol | |
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| ID | 3743134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 14074 |
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| End bp | 15483 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637770177 |
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| Product | serine phosphatase |
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| Protein accession | YP_376030 |
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| Protein GI | 78183596 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.407331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCAGCA AGCCACCCCG TCGTCATTCC ACCCCGGTCC AGCGGGCTGT AGCTCCTTCG
CCGCAGGCGA TGGCGTCGTT GCGTCAATTG TTCGACAGCT TGAGCAACGA ACAGCGACGC
AACCAGGATC TGCTGGTGTC GCTGGCTTTT GCCCTGCGCA GTTTTACCAA CCTGCATCGC
TTTTTAGAGC TGGTGCCTGT TGTGGTGTCT CGACTTGTGG GAGTCGATGG TGCTCTCATC
GTGCCGTTTC AATCCGATGG TCGTTTGTGG CGCGATCAAC TTCAGGCTGT CCCCGTTGAG
CAGTCTCAGG ACCTTTTTCG CCGCTTAGCG AGCTTCCAGC CAGGGGAATC AGCTGGTTTT
GGCACCGATG ACGCCCAGAT GTTGGCCTTG GATCGATTGG TCCAACGCTG TCTTCCGAAG
GCGGGCTTAT TCGCTACATC CGTGGTGGTT CGCGGTCGAT GTCGCGGTCG TTTGTACGTG
TTTGATCCTT CGTCCGAATT GGTTTGGACC GAGGTGCATC GCCGTCATGC CCAATTGGTG
GCCGATTTGG CGGGGGTAGC GATCGAAAAT GATTTGATGT TGCAAGATGC CCGTCGCCAT
GAACGGGTTG ATCGCCAGCT GAGCATTGGG GCGGAAATTC AGGCCCAATT GCTGCCCGAT
CATTGCCCGG TGATTGAGGG TGTGGAGCTT GCCGCTCGAT GCCGTCCAGC CTTCCAAGTG
GGAGGTGATT ACTACGATTT CATTCCCACG CGTCCTGAAC TCATTGGTCG GCGACGGGAA
CGTGGTCGCT GGGCATTGGT CATGGGCGAT GTGATGGGAA AGGGTGTTCC CGCTGGTTTG
CTGATGACCA TGTTGCGCGG GATGCTCCGT GCGGAAGTTC TCAGTGGATT ATCACCCGAT
CGCATCCTTC ATGACCTCAA CCAACTCGCC CAAGAGGACC TTGCGCAATC CCACAGATTC
GTGACGTTGT TTTATTCGGA TTTCGATCCG CGAACACGTC GTTTGCGATA TGCCAATGCA
GCCCATAACC CCCCTTTGCT CTGGCGCTCA GAGCAAAGAA GTATCAGCAG GTTGGATGCT
GCTGGTTTGC TGATTGGATT ACAGCCGGAG GCGGATTATG GGCTCGGTGA AGTGCGGCTG
GATCCGGGTG ATGTTCTCCT CTATTACACC GATGGTGTCA CCGAAGCGCC TGGAATAACG
GGAGATCGCT TTGATGAAGC TCGGTTGATT CGTGCCTTGG AGAGTGCCTG CCGCAGTGGC
CAAGGGTCCC AGGGAATTCT CGACACCTTG TTTGAGCGTC TCGATCGATT TGTGGGGGCG
AACCGACAGC TCGAAGACGA CGCCTCCATG GTGGTGTTGA AAGTGCCCGA GGCGGTCACA
CTGCCAAACA TGGTTGTTCC ATTGCCTTAG
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| Protein sequence | MSSKPPRRHS TPVQRAVAPS PQAMASLRQL FDSLSNEQRR NQDLLVSLAF ALRSFTNLHR
FLELVPVVVS RLVGVDGALI VPFQSDGRLW RDQLQAVPVE QSQDLFRRLA SFQPGESAGF
GTDDAQMLAL DRLVQRCLPK AGLFATSVVV RGRCRGRLYV FDPSSELVWT EVHRRHAQLV
ADLAGVAIEN DLMLQDARRH ERVDRQLSIG AEIQAQLLPD HCPVIEGVEL AARCRPAFQV
GGDYYDFIPT RPELIGRRRE RGRWALVMGD VMGKGVPAGL LMTMLRGMLR AEVLSGLSPD
RILHDLNQLA QEDLAQSHRF VTLFYSDFDP RTRRLRYANA AHNPPLLWRS EQRSISRLDA
AGLLIGLQPE ADYGLGEVRL DPGDVLLYYT DGVTEAPGIT GDRFDEARLI RALESACRSG
QGSQGILDTL FERLDRFVGA NRQLEDDASM VVLKVPEAVT LPNMVVPLP
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