Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2617 |
Symbol | |
ID | 3737506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2428916 |
End bp | 2429665 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637777201 |
Product | putative ATP-binding subunit of urea ABC transport system |
Protein accession | YP_382897 |
Protein GI | 78214118 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0781803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.377264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAA CCATTCTTGA TCTAGACGAC GTCAGCGTCA GTTTTGATGG CTTCTATGCC CTCACAGATC TTTCCTTTTC GCTACGCCCC GGCGAGCTTC GCTCGATTAT CGGCCCAAAT GGAGCCGGTA AAACAACTTT CCTGGATGTG ATTACTGGCA AAGTCCGTCC AACAAAAGGG GATGTGACAC TCCGAGGCAA AAGCATCGTC GGCCTCTCTG AGCAAAAGAT TTCTCGCCTT GGCGTCGGAC GTAAGTTCCA GACTCCTCGT GTTTGGGAGA ATTTGACTGT TCAGCGTAAT CTTGAGCTTA CGGCATCGCC TAACAAGAAT CCCTTCGCGC TCCTCACTGA AACTTTGAGT GATGTAGTCA AAGACGAAGT CTTTAAGATC ATGGAGTATG TCGGTCTTGC TCCTTATGCC AAGTGGCAGG CGGGTTCGTT GTCCCACGGT CAGAAGCAGT GGCTTGCTAT TTCCATGTTA GTTGCCCAGT CTCCCGATAT TATTCTTTTG GATGAACCCG TCGCTGGTCT GACGGATGAA GAAACGTCCA AAACTGCAGA TCTAATCAAA TCCCTTGCAG GCGAGCACAC TGTTGTTGTG ATTGAACACG ACATGGAGTT TATCCGTGAT CTTGGTGCTC CTGTTACTGT GCTTCATCAA GGACAGAAAC TGACGGAAGG GATGCTGGAG GAGGTAAAGG CAGATCCCCG TGTTATTGAA GTGTATCTTG GTGAATCTGA TGATGACTAA
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Protein sequence | MSQTILDLDD VSVSFDGFYA LTDLSFSLRP GELRSIIGPN GAGKTTFLDV ITGKVRPTKG DVTLRGKSIV GLSEQKISRL GVGRKFQTPR VWENLTVQRN LELTASPNKN PFALLTETLS DVVKDEVFKI MEYVGLAPYA KWQAGSLSHG QKQWLAISML VAQSPDIILL DEPVAGLTDE ETSKTADLIK SLAGEHTVVV IEHDMEFIRD LGAPVTVLHQ GQKLTEGMLE EVKADPRVIE VYLGESDDD
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