| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2565 |
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| Symbol | |
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| ID | 3737086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 2380697 |
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| End bp | 2382685 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777150 |
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| Product | sigma-54 factor |
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| Protein accession | YP_382848 |
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| Protein GI | 78214069 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0348] Polyferredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.289153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAGCT GCTCAGTGCT TGACCCATCA GCGTCTCTCT TGTTGTTGAG TCCGTACGCA
ACGGGCCGCC CCCACCGGGG CGTGGTGGGG GCCAGCCGTT ATGCACAGCG GCTACGTCAG
GACCTGATCA ATGCTGCGGA AGACCCGAAC AATCGGACCC TGATGATTCG AGGCGAGCCG
GGTCTGGGCA AGAACAACCT GGCGGCGCTG GTGCACTTCG GCTCCAACCA GCGCCGCAAG
CTGCTGGTTC GGCTGGACGC CACCGATCTC AAAACCAAAG CCGACGTTCT CCTGGATGCC
ATCGGTGAGA ACACCCTGCT GGTAAGCAGC GTGGACCAGC TGGACCCAGA ACTACAGCAG
CGCCTTGCTG CCATGGCCAA TGGAGAACAT CCGGGCTTCA GCGGCCGCGT GATTTTCACC
AGTGAAAGCT GCGTGCCGAG CCTCGACGCC ATCAGCCAGG TCATTCGCGT GCCACCGCTA
CGGGTGCGCC GATCGGATCT GGGCGACTGG CTGCGTTATC AATTGCGCCT ACAAAGCCCT
GGCCTGGGCT GGGTGAAGCC TCCCGCGCTG CCGGAGGCGG TGGTGCGGCG GCTGCAAAAC
CACGATTTCG CCGACAACCT TCGCGAATTG GAAGGTCTAG TCAATCGGGC CCTGCGTCAA
GCGCGCCGCC AGAACCACGA TCTACCGCCC GCTGTGCTGG TGGAGGAGAT GTTCTGGACA
GAGCAAAGAA AAGAACGAGC CCGCTTCGAT TTATGGCGCT GGAAACCCCA GCTGCGGGGA
TGGATGCGGG CTCCAAAGCT CTGGGATGGC CTGCTGTTCG GGCTGGTGAG CTGGCTGTTC
GTGGTCGTGA ACCTGGTGCT CTGGCTTGGC CCGCAGGACC GCGCAGCCAA TCCGATGCTG
AATCTGTTCT GGGCCTGGTG GTGGCCGTTG ATCCTGCTGA GCTACCCGCT TGTGGGTCGC
CTCTGGTGCG CCATCTGTCC CTTCATGGTC TGGGGACAGA TAGCTCAAAA GCTGACCCCG
TGGCGCAAGA AAAGCTGGCC CCATGGGGAC ATGGACCGCT GGGGAGCGCC TGTACTCGCC
GCCGGTTTTG CCGTGATTCT CCTTTGGGAA GAGGTCTGGA ACCTGGAGAA CACCGCCTGG
CTGAGCAGCT GCTTGTTGTT GCTGATCACA GCAGGCGCTG TGGTGGGCTC ACTGCTCTTC
GAAAAACGGT TCTGGTGTCG CTATCTCTGT CCGGTTGGTG GCATGAACGG CCTGTTCGCC
AAGCTTTCAA TCCTGGAACT GCGGGCTGAG TCAGGGACCT GCAGCGGCAG TTGTAGCAGC
TATGCCTGCT TCAAGGGAGG AGCGGCGGAT GGGGAAGGAC TGGAAACCAA CGGCTGTCCC
TTAGGGAGCC ACCCCGCCCA TCTGAGCGAC AACCGCAACT GTGTGCTCTG CATGAGCTGC
GTCCAGGCCT GCCCGAATCG ATCTCCTCAA CTGCGCTTGC GTCCGCCCGC CGCAGACCTT
CAACCAAACA TGCACACGCC CAGCTCCGAG CGTGGACTGA TCCTGGTGCT GGCCGGAGGC
ATTTGCCTGC ACCACTGGCA ACGCCTGCTG GGCTGGCTGC CCCTTGCACC GTCCTCATTG
CATGAAGGCC CCCTGCTGGC CCGGCTCAGC TTTGCGGTGC TTGCTCTTGC CTTACCAGCT
GCCATTGGCT TGTGGCTCAA CCACCGATGG CTCTACGCAG GATTGCCACT GCTCTGGGCC
CTGCTGCTGG CACGCCATCT GCCCATCGGC ATGGCCGAAG CGGGCACCGT CTTGCCGCAT
GGCTGGCCGC AATGGTCGGC CGACCCTCAT GTGATCGGCT TCTGCCAAAC CTTGGTGGTG
GGGATCGGAT GGATTGGAGC AGCAATCTTG AGTCGCCGCT TGCTGGATCT CGACAGCAGG
GCCTGGGTCA TGGGCAGCAT GGTGCTGCTT CTGGTCAGCT TCAGCGGCCG CTGGTTGGTC
GCCCTTTAA
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| Protein sequence | MKSCSVLDPS ASLLLLSPYA TGRPHRGVVG ASRYAQRLRQ DLINAAEDPN NRTLMIRGEP
GLGKNNLAAL VHFGSNQRRK LLVRLDATDL KTKADVLLDA IGENTLLVSS VDQLDPELQQ
RLAAMANGEH PGFSGRVIFT SESCVPSLDA ISQVIRVPPL RVRRSDLGDW LRYQLRLQSP
GLGWVKPPAL PEAVVRRLQN HDFADNLREL EGLVNRALRQ ARRQNHDLPP AVLVEEMFWT
EQRKERARFD LWRWKPQLRG WMRAPKLWDG LLFGLVSWLF VVVNLVLWLG PQDRAANPML
NLFWAWWWPL ILLSYPLVGR LWCAICPFMV WGQIAQKLTP WRKKSWPHGD MDRWGAPVLA
AGFAVILLWE EVWNLENTAW LSSCLLLLIT AGAVVGSLLF EKRFWCRYLC PVGGMNGLFA
KLSILELRAE SGTCSGSCSS YACFKGGAAD GEGLETNGCP LGSHPAHLSD NRNCVLCMSC
VQACPNRSPQ LRLRPPAADL QPNMHTPSSE RGLILVLAGG ICLHHWQRLL GWLPLAPSSL
HEGPLLARLS FAVLALALPA AIGLWLNHRW LYAGLPLLWA LLLARHLPIG MAEAGTVLPH
GWPQWSADPH VIGFCQTLVV GIGWIGAAIL SRRLLDLDSR AWVMGSMVLL LVSFSGRWLV
AL
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