| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2340 |
|---|
| Symbol | |
|---|
| ID | 3736486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2154805 |
|---|
| End bp | 2156379 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637776928 |
|---|
| Product | Elongator protein 3/MiaB/NifB |
|---|
| Protein accession | YP_382627 |
|---|
| Protein GI | 78213848 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTC TTTTCGTATA CCCCGAATTC CCGAAGACCT TCTGGAGTTA CGAAAAGATT
CTCGAGCTTG TGAATCGCAA AGTGCTGCTG CCTCCCCTAG GGATGGTCAC CGTGGCAGCA
CTTCTCCCCC AGGAATGGGA GATGAAGCTG GTGGACCGGA ACGTTAGGGA GGTGACGGAG
GAGGAGTGGG ATTGGGCTGA GCTGGTGATC ATTTCGGGAA TGATCGTCCA GAAGGACGAC
ATGGCCGTGC AGATCGGCAA GGCCAAACAG CGCGGGCTGC CGGTGGCGAT TGGCGGCCCC
TTCGCCAGTT CCACACCGGA TGCACCAGAA CTGGATCTGG CGGATTTCAA GATCCTCGAT
GAGGGGGAAA TCACCCTGCC GATGTTCCTG GATGCCCTGG AACGGGGAGA GGCCAGTGGC
CGTTTCAGCG CCGAGGGAGA CAAGCCAGAT GTCACCGCCA CCCCGATTCC ACGCTTCGAT
CTTCTGCAAC TCGAGGCCTA CGACTCGATG AGCGTGCAGT TCTCGCGGGG CTGCCCCTTC
AACTGCGAGT TCTGCGACAT CATCGTTCTC TATGGCCGCA AGCCCCGCAC CAAAACCCCC
GAGCAGCTGG TGGCTGAGCT GCAATACCTC TACGACCTGG GCTGGCGGCG CTCAATCTTC
CTGGTGGACG ACAACTTCAT CGGCAACAAA CGCAACGCCA AGTTGCTGCT GCCGCAGATC
CGCACCTGGC AGGAAGAGCG GGGTTACCCC TTCAGCTTCG CTACCGAAGC CTCTGTGGAC
CTGGCCGACG ACGACGAGAT GATGCGGATG ATGCACGACG CCCGTTTCGA AAGCGTCTTT
CTGGGCATCG AAACCCCGGA CGAAGCCAGC CTGGAAACGG CTCGCAAGGT GCAGAACACG
CGCAACCCAC TGGATGCCGC GGTGGACCGG ATCACCGCCA ACGGAATCCG CGTGATGGCG
GGTTTCATCA TCGGTTTCGA CGGCGAGAAG GATGGTGCAG GCCACCGCAT CGTGGACTTT
GTGACCCGCA CAGGCATCCC CGCCGCGATG ATGGGCATGT TGCAAGCGCT GCCCAAGACA
GCCCTCTGGG CACGGCTGGA GCGGGAAGGG CGCCTGATCC AAGGGGAAGA TGCCGCCAAG
GGCGTGAACC AAACCAACCT GCTGAACTTC AAACCCACCC GACCGATCCG CGACATTGCC
AACGAGTACG TGGACGCGTT CTGCGCGCTC TACGAACCCA ACGCCTACAT GGACCGGGTT
TACAGCTATT ACCTGAAGAT GGGGGCTCCC CGCTGGAAAG CCGCGGCCAA ACTGCCCAGC
CTGGTGGACC TCAAGGCCCT GAGCATTGTG GTTTGGCGGC AGGGCATCAA GCGCAACACC
CGCACCCGTT TCTGGGGCTA TCTGTTCGGT ATGGCACGAA AAAACCCCGC CCTGCTGGAA
CAGTTCCTCT CGGTGCTGGC CCACAACGAG CACTTCCTCG AGTACCGCTC GATCGTTCAG
CGTGAAATCC GCGAACAACT TGAAGCTCTA CCGCCTGAAG AACCCACGGC AGCCAAAGAA
CTGCAGCCTG CCTAA
|
|---|
| Protein sequence | MRTLFVYPEF PKTFWSYEKI LELVNRKVLL PPLGMVTVAA LLPQEWEMKL VDRNVREVTE
EEWDWAELVI ISGMIVQKDD MAVQIGKAKQ RGLPVAIGGP FASSTPDAPE LDLADFKILD
EGEITLPMFL DALERGEASG RFSAEGDKPD VTATPIPRFD LLQLEAYDSM SVQFSRGCPF
NCEFCDIIVL YGRKPRTKTP EQLVAELQYL YDLGWRRSIF LVDDNFIGNK RNAKLLLPQI
RTWQEERGYP FSFATEASVD LADDDEMMRM MHDARFESVF LGIETPDEAS LETARKVQNT
RNPLDAAVDR ITANGIRVMA GFIIGFDGEK DGAGHRIVDF VTRTGIPAAM MGMLQALPKT
ALWARLEREG RLIQGEDAAK GVNQTNLLNF KPTRPIRDIA NEYVDAFCAL YEPNAYMDRV
YSYYLKMGAP RWKAAAKLPS LVDLKALSIV VWRQGIKRNT RTRFWGYLFG MARKNPALLE
QFLSVLAHNE HFLEYRSIVQ REIREQLEAL PPEEPTAAKE LQPA
|
|---|
| |