| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2284 |
|---|
| Symbol | |
|---|
| ID | 3736226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2092861 |
|---|
| End bp | 2093505 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637776868 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_382573 |
|---|
| Protein GI | 78213794 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2345] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02702] iron-sulfur cluster biosynthesis transcriptional regulator SufR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.123055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT CGGCCCCCGC CAACACCCGC GACGCCGTGC TCTCCCTGCT GCTGGAGCGC
GGGGAGGAGG ACGCTGGCAC CCTCGCCGGG GCCGTAGGCA TTTCCGTGCA GGCCATGCGG
CGGCACCTGC GCTCCCTTGC CGACAGCGGC CTGGTCCGCG CCAGCAGCAA TGCCAGCGGT
CCGGGTCGTC CCAGCAACCG CTGGTGCCTC ACCGACGAAG GACGGGCCCA GTTCCCCGAT
GGCAGCGGCC GCTTCGCCCT CGGCCTGCTG AATTCGATGC GCAGCCATCT CCCCGAAGCA
ACCGTGCGCC AGCTGCTGAA TCAGCAGGCG GAGTCAAAGG CCAGCCAGTA CCGGCAAAGC
CTCGGCGAAG CCTCCCTGGA AGCTCGACTC GAACACCTGG CACGGCTGCG CCGCGACGAG
GGCTACGTGA CGGTCTGCAA CCGGGACGAC GACGGCATCA GCTGGCGGCT CGAGGAAGCC
CACTGCTCCG TGCAGCGCAT TGCCGAAGAA TTTCCTGCGG TCTGCGACCA GGAATTGCTG
CTGATTCGCC GCACCGTGCC GGACTGCCGG GTGGAACGGG TGCATTGGCG GCTCGAGGGG
GGGCACGCCT GCGGGTTCCG CATCACCCCG TTGGCGCAGG GCTGA
|
|---|
| Protein sequence | MSASAPANTR DAVLSLLLER GEEDAGTLAG AVGISVQAMR RHLRSLADSG LVRASSNASG
PGRPSNRWCL TDEGRAQFPD GSGRFALGLL NSMRSHLPEA TVRQLLNQQA ESKASQYRQS
LGEASLEARL EHLARLRRDE GYVTVCNRDD DGISWRLEEA HCSVQRIAEE FPAVCDQELL
LIRRTVPDCR VERVHWRLEG GHACGFRITP LAQG
|
|---|
| |